Carubv10011014m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10011014m.g T286304_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10011014m Myb 14 61
Carubv10011014m Myb 67 112

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra015911 Brassica rapa Bra015911 N 0.732
Thhalv10018987m.g Eutrema salsugineum Thhalv10018987m.g N 0.732
Thhalv10008528m.g Eutrema salsugineum Thhalv10008528m.g N 0.681
Carubv10010045m.g Capsella rubella Carubv10010045m.g N 0.765
Cagra.4153s0010 Capsella grandiflora Cagra.4153s0010 N 0.665
Bostr.7128s0481 Boechera stricta Bostr.7128s0481 N 0.673
Bostr.7128s0480 Boechera stricta Bostr.7128s0480 N 0.726
fgenesh1_pg.C_scaffold_1001692 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001692 N 0.694
AtMYB47 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001691 N 0.766
Bra025678 Brassica rapa Bra025678 N 0.725
Bra016546 Brassica rapa Bra016546 N 0.705
Bra015912 Brassica rapa Bra015912 N 0.714
AtMYB47 Arabidopsis thaliana AT1G18710 N 0.722
Bra008149 Brassica rapa Bra008149 N 0.668
Bra003801 Brassica rapa Bra003801 N 0.732
Bo8g091100 Brassica oleracea Bo8g091100 N 0.702
Bo8g068030 Brassica oleracea Bo8g068030 N 0.688
Bo6g118730 Brassica oleracea Bo6g118730 N 0.732
Bo6g118710 Brassica oleracea Bo6g118710 N 0.714
Bo6g087030 Brassica oleracea Bo6g087030 N 0.723
Bo5g025790 Brassica oleracea Bo5g025790 N 0.720
Bo5g025730 Brassica oleracea Bo5g025730 N 0.725
Bo2g081100 Brassica oleracea Bo2g081100 N 0.665