Carubv10012879m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10012879m.g T286322_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10012878m Myb 43 88
Carubv10012879m Myb 43 88

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSACAG00000001033 Anolis carolinensis ENSACAG00000001033 I
tbx20 Danio rerio ENSDARG00000005150 I
SMRZ_0000901601 Schistosoma margrebowiei SMRZ_0000901601 I
SCUD_0001668701 Schistosoma curassoni SCUD_0001668701 I
ENSTGUG00000007802 Taeniopygia guttata ENSTGUG00000007802 I
NEMVEDRAFT_v1g88753 Nematostella vectensis NEMVEDRAFT_v1g88753 I
Brh_R013163 Buceros rhinoceros Brh_R013163 I
nOo.2.0.1.g12774 Onchocerca ochengi nOo.2.0.1.g12774 N
DILT_0001799701 Diphyllobothrium latum DILT_0001799701 N
EEL_0001013401 Elaeophora elaphi EEL_0001013401 N
EVEC_0000447801 Enterobius vermicularis EVEC_0000447801 N
nDi.2.2.2.g08784 Dirofilaria immitis nDi.2.2.2.g08784 N
nLs.2.1.2.g03986 Litomosoides sigmodontis nLs.2.1.2.g03986 N
nOo.2.0.1.g07550 Onchocerca ochengi nOo.2.0.1.g07550 N
Minc16694 Meloidogyne incognita Minc16694 N
SROB_0001443501 Schistosoma rodhaini SROB_0001443501 N
TCLT_0000604201 Thelazia callipaeda TCLT_0000604201 N
TCNE_0000641501 Toxocara canis TCNE_0000641501 N
BTMF_0001772901 Brugia timori BTMF_0001772901 N
augustus_masked-nMf.1.1.scaf40912-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf40912-processed-gene-0.0 N
WUBG_11141 Wuchereria bancrofti WUBG_11141 N
Tal_R008745 Tyto alba Tal_R008745 N
Hsal_09270--XP_394607.3_APIME Harpegnathos saltator Hsal_09270--XP_394607.3_APIME N
LOAG_18576 Loa loa LOAG_18576 N
ENSTGUG00000013956 Taeniopygia guttata ENSTGUG00000013956 N
ENSOARG00000011096 Ovis aries ENSOARG00000011096 N
ENSDNOG00000008614 Dasypus novemcinctus ENSDNOG00000008614 N
CJA31660 Caenorhabditis japonica CJA31660 N
ACEP16058 Atta cephalotes ACEP16058 N
ACEP16054 Atta cephalotes ACEP16054 N