CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw2.14.322.1
(
Micromonas sp RCC299
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
e_gw2.14.322.1
T286700_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
e_gw1.09.00.361.1
M01288_2.00
Ostreococcus tauri
AACGGHHHND
HNDDDCCGTT
PBM
Lambert et al.(2019)
pTH9820
0.666
0.807
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
88104
Myb
11
57
KGGWTPDEDDILRRAVAQYKGKNWKKIAEYFEERTDVQCLHRWQKVL
88104
Myb
63
109
KGPWTKEEDDKIIELVGQLGAKQWSKIAQQLPGRIGKQCRERWYNHL
88104
Myb
115
160
REEWSREEDRKLIIAHHQFGNRWAEIAKTFVGRTDNAIKNHWNSTL
Links
Other
Myb/SANT
family TFs
Other
Micromonas sp RCC299
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OLIG1
Homo sapiens
ENSG00000184221
D
OLIG1
Oryctolagus cuniculus
ENSOCUG00000027389
I
OLIG1
Vicugna pacos
ENSVPAG00000005098
I
ENSSTOG00000027713
Ictidomys tridecemlineatus
ENSSTOG00000027713
I
OLIG1
Sus scrofa
ENSSSCG00000012040
I
Olig1
Rattus norvegicus
ENSRNOG00000028648
I
OLIG1
Pteropus vampyrus
ENSPVAG00000001702
I
OLIG1
Pan troglodytes
ENSPTRG00000031440
I
OLIG1
Ochotona princeps
ENSOPRG00000007722
I
OLIG1
Otolemur garnettii
ENSOGAG00000033584
I
OLIG1
Canis familiaris
ENSCAFG00000031953
I
Olig1
Mus musculus
ENSMUSG00000046160
I
OLIG1
Macaca mulatta
ENSMMUG00000001558
I
ENSLAFG00000007964
Loxodonta africana
ENSLAFG00000007964
I
OLIG1
Dasypus novemcinctus
ENSDNOG00000042196
I
ENSCSAG00000018686
Chlorocebus sabaeus
ENSCSAG00000018686
I
ENSCPOG00000020839
Cavia porcellus
ENSCPOG00000020839
I
OLIG2
Callithrix jacchus
ENSCJAG00000009439
I