Eucgr.B03941 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.B03941 T286779_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAX3
M02700_2.00 		Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS		 SELEX
Mathelier et al.(2014)
MA0576.1 		0.771 0.839
RAX3
M11043_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB84_01 		0.771 0.839
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.B03941.1 Myb 14 62
Eucgr.B03941.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

444 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_4DL_FA07D8414 Triticum aestivum Traes_4DL_FA07D8414 I
OPUNC06G16360 Oryza punctata OPUNC06G16360 I
ORGLA02G0087700 Oryza glaberrima ORGLA02G0087700 I
ORUFI02G09810 Oryza rufipogon ORUFI02G09810 I
ORUFI06G19310 Oryza rufipogon ORUFI06G19310 I
HSFC2A Oryza sativa OS02G0232000 I
OS06G0553100 Oryza sativa OS06G0553100 I
Sb04g008300 Sorghum bicolor Sb04g008300 I
Sb10g021800 Sorghum bicolor Sb10g021800 I
TRAES3BF025700030CFD_g Triticum aestivum TRAES3BF025700030CFD_g I
TRAES3BF025700050CFD_g Triticum aestivum TRAES3BF025700050CFD_g I
Traes_4BL_B64C157DC Triticum aestivum Traes_4BL_B64C157DC I
Traes_4DL_9A51D1EB2 Triticum aestivum Traes_4DL_9A51D1EB2 I
OPUNC02G08730 Oryza punctata OPUNC02G08730 I
TRIUR3_12841 Triticum urartu TRIUR3_12841 I
Pm027421 Prunus mume Pm027421 I
29912.m005526 Ricinus communis 29912.m005526 I
Ciclev10008768m.g Citrus clementina Ciclev10008768m.g I
gene30881-v1.0-hybrid Fragaria vesca gene30881-v1.0-hybrid I
MDP0000230456 Malus domestica MDP0000230456 I
orange1.1g018495m.g Citrus sinensis orange1.1g018495m.g I
Pavir.Aa02860 Panicum virgatum Pavir.Aa02860 I
Pavir.Ab00907 Panicum virgatum Pavir.Ab00907 I
Pavir.J17014 Panicum virgatum Pavir.J17014 I
Pavir.J36148 Panicum virgatum Pavir.J36148 I
MLOC_73300 Hordeum vulgare MLOC_73300 I
BGIOSGA021054 Oryza indica BGIOSGA021054 I
Bra013253 Brassica rapa Bra013253 I
BRADI1G38140 Brachypodium distachyon BRADI1G38140 I
BRADI3G08870 Brachypodium distachyon BRADI3G08870 I
F775_44074 Aegilops tauschii F775_44074 I
GRMZM2G105348 Zea mays GRMZM2G105348 I
GRMZM2G118047 Zea mays GRMZM2G118047 I
GSMUA_Achr10G27810_001 Musa acuminata GSMUA_Achr10G27810_001 I
GSMUA_Achr4G30990_001 Musa acuminata GSMUA_Achr4G30990_001 I
LPERR02G08320 Leersia perrieri LPERR02G08320 I
LPERR06G14980 Leersia perrieri LPERR06G14980 I
MLOC_68417 Hordeum vulgare MLOC_68417 I
BGIOSGA007838 Oryza indica BGIOSGA007838 I
OB06G25820 Oryza brachyantha OB06G25820 I
OBART02G33140 Oryza barthii OBART02G33140 I
OBART06G18200 Oryza barthii OBART06G18200 I
OGLUM02G09850 Oryza glumaepatula OGLUM02G09850 I
OGLUM06G19290 Oryza glumaepatula OGLUM06G19290 I
OLONG_005056 Oryza longistaminata OLONG_005056 I
OLONG_008747 Oryza longistaminata OLONG_008747 I
OMERI02G11000 Oryza meridionalis OMERI02G11000 I
OMERI06G18730 Oryza meridionalis OMERI06G18730 I
ONIVA02G10840 Oryza nivara ONIVA02G10840 I
ONIVA06G21600 Oryza nivara ONIVA06G21600 I