evm.TU.supercontig_1055.1 (Carica papaya)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 evm.TU.supercontig_1055.1 T287025_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.891 0.935
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.891 0.935
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.881 0.935
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.836 0.870
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.836 0.870
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.800 0.826
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.800 0.826
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.800 0.826
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.800 0.826
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.800 0.826
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.767 0.848
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.767 0.848
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.767 0.848
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.766 0.826
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_1055.1 Myb 24 69

Links

Other Myb/SANT family TFs
Other Carica papaya TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF264 Homo sapiens ENSG00000083844 D
ZNF805 Macaca mulatta ENSMMUG00000006010 I
Myotis_brandtii_ZNF264_10004205 Myotis brandtii Myotis_brandtii_ZNF264_10004205 I
ENSP00000263095 Macaca fascicularis ENSP00000263095 I
ENSBTAP00000018112-D1 Bos grunniens ENSBTAP00000018112-D1 I
ZNF264 Pteropus vampyrus ENSPVAG00000003021 I
ZNF264 Pan troglodytes ENSPTRG00000011546 I
ZNF264 Otolemur garnettii ENSOGAG00000011115 I
ZNF264 Oryctolagus cuniculus ENSOCUG00000029243 I
ENSNLEG00000010888 Nomascus leucogenys ENSNLEG00000010888 I
ENSMPUG00000006448 Mustela putorius furo ENSMPUG00000006448 I
ENSAMEG00000004929 Ailuropoda melanoleuca ENSAMEG00000004929 I
ZNF264 Myotis lucifugus ENSMLUG00000016720 I
ZNF264 Gorilla gorilla ENSGGOG00000006173 I
ZNF264 Felis catus ENSFCAG00000013572 I
ZNF264 Equus caballus ENSECAG00000021397 I
ENSCSAG00000001654 Chlorocebus sabaeus ENSCSAG00000001654 I
ZNF264 Callithrix jacchus ENSCJAG00000000022 I
ZNF264 Canis familiaris ENSCAFG00000030732 I