Gorai.003G130700 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.003G130700 T287516_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.909 0.979
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.901 0.957
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.901 0.957
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.891 0.979
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.849 0.979
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.003G130700.1 Myb 597 647
Gorai.003G130700.2 Myb 587 637
Gorai.003G130700.3 Myb 576 626
Gorai.003G130700.4 Myb 566 616
Gorai.003G130700.5 Myb 597 627
Gorai.003G130700.6 Myb 597 647

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

207 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CTCF Homo sapiens ENSG00000102974 D 0.000
Ctcf Mus musculus ENSMUSG00000005698 D 0.000
CTCF Pteropus vampyrus ENSPVAG00000016588 I 0.000
CTCF Tursiops truncatus ENSTTRG00000009184 I 0.000
ctcf Takifugu rubripes ENSTRUG00000017943 I 0.000
ctcf Tetraodon nigroviridis ENSTNIG00000009314 I 0.000
ENSSTOG00000024951 Ictidomys tridecemlineatus ENSSTOG00000024951 I 0.000
ENSSHAG00000003783 Sarcophilus harrisii ENSSHAG00000003783 I 0.000
CTCF Sorex araneus ENSSARG00000006220 I 0.000
Ctcf Rattus norvegicus ENSRNOG00000017674 I 0.000
CTCF Vicugna pacos ENSVPAG00000004409 I 0.000
CTCF Pan troglodytes ENSPTRG00000008235 I 0.000
ENSPSIG00000003593 Pelodiscus sinensis ENSPSIG00000003593 I 0.000
ENSPPYG00000007461 Pongo abelii ENSPPYG00000007461 I 0.000
ENSPFOG00000001733 Poecilia formosa ENSPFOG00000001733 I 0.000
CTCF Procavia capensis ENSPCAG00000009389 I 0.000
ENSPANG00000015703 Papio anubis ENSPANG00000015703 I 0.000
ctcf Oryzias latipes ENSORLG00000018357 I 0.000
CTCF Ochotona princeps ENSOPRG00000013470 I 0.000
ENSXMAG00000014187 Xiphophorus maculatus ENSXMAG00000014187 I 0.000
ENSXMAG00000016342 Xiphophorus maculatus ENSXMAG00000016342 I 0.000
Aan_R007092 Calypte anna Aan_R007092 I 0.000
Afo_R001863 Aptenodytes forsteri Afo_R001863 I 0.000
Alligator_sinensis_CCG009162.1 Alligator sinensis Alligator_sinensis_CCG009162.1 I 0.000
Brh_R001555 Buceros rhinoceros Brh_R001555 I 0.000
Cmyd_10002494 Chelonia mydas Cmyd_10002494 I 0.000
ENSBTAP00000018279-D1 Bos grunniens ENSBTAP00000018279-D1 I 0.000
ENSP00000264010 Macaca fascicularis ENSP00000264010 I 0.000
Gfo_R016015 Geospiza fortis Gfo_R016015 I 0.000
Myotis_brandtii_Ctcf_10015071 Myotis brandtii Myotis_brandtii_Ctcf_10015071 I 0.000
Pvit_02093 Pogona vitticeps Pvit_02093 I 0.000
Tal_R013354 Tyto alba Tal_R013354 I 0.000
ctcf Xenopus tropicalis XB-GENE-862914 I 0.000
ctcf.L Xenopus laevis XB-GENE-864809 I 0.000
CTCF Gorilla gorilla ENSGGOG00000001063 I 0.000
ENSAMEG00000017438 Ailuropoda melanoleuca ENSAMEG00000017438 I 0.000
ENSAPLG00000007458 Anas platyrhynchos ENSAPLG00000007458 I 0.000
CTCF Bos taurus ENSBTAG00000013757 I 0.000
CTCF Canis familiaris ENSCAFG00000020355 I 0.000
CTCF Callithrix jacchus ENSCJAG00000016139 I 0.000
CTCF Cavia porcellus ENSCPOG00000010698 I 0.000
ENSCSAG00000003911 Chlorocebus sabaeus ENSCSAG00000003911 I 0.000
ctcf Danio rerio ENSDARG00000056621 I 0.000
CTCF Dasypus novemcinctus ENSDNOG00000038156 I 0.000
CTCF Equus caballus ENSECAG00000015924 I 0.000
ENSFALG00000007163 Ficedula albicollis ENSFALG00000007163 I 0.000
CTCF Felis catus ENSFCAG00000003492 I 0.000
ctcf Gasterosteus aculeatus ENSGACG00000002504 I 0.000
ctcf Gasterosteus aculeatus ENSGACG00000015865 I 0.000
CTCF Gallus gallus ENSGALG00000001817 I 0.000
ctcf Oryzias latipes ENSORLG00000008771 I 0.000
ENSGMOG00000006386 Gadus morhua ENSGMOG00000006386 I 0.000
ENSLACG00000009833 Latimeria chalumnae ENSLACG00000009833 I 0.000
CTCF Loxodonta africana ENSLAFG00000007101 I 0.000
CTCF Meleagris gallopavo ENSMGAG00000002200 I 0.000
CTCF Microcebus murinus ENSMICG00000012128 I 0.000
CTCF Myotis lucifugus ENSMLUG00000005216 I 0.000
CTCF Monodelphis domestica ENSMODG00000005757 I 0.000
ENSMPUG00000006401 Mustela putorius furo ENSMPUG00000006401 I 0.000
ENSNLEG00000004747 Nomascus leucogenys ENSNLEG00000004747 I 0.000
CTCF Oryctolagus cuniculus ENSOCUG00000008983 I 0.000
CTCF Otolemur garnettii ENSOGAG00000011901 I 0.000
ENSONIG00000004097 Oreochromis niloticus ENSONIG00000004097 I 0.000
ENSONIG00000005736 Oreochromis niloticus ENSONIG00000005736 I 0.000
CTCF Anolis carolinensis ENSACAG00000001050 I 0.000