Lus10009884.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10009884.g T287929_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G05790
M07119_2.00 		Arabidopsis thaliana
HWYMTTATCHWNWHH
DDWNWDGATAAKRWD		 Dap-seq
OMalley et al.(2016)
At5g05790_col_a 		0.740 0.819
AT3G11280
M01075_2.00 		Arabidopsis thaliana
NNTTATCNNN
NNNGATAANN		 PBM
Sullivan et al.(2014)
pTH7245 		0.736 0.819
AT3G11280
M07074_2.00 		Arabidopsis thaliana
DWDWDGATAAKRWW
WWYMTTATCHWHWH		 Dap-seq
OMalley et al.(2016)
At3g11280_col_a 		0.736 0.819
AT3G11280
M07075_2.00 		Arabidopsis thaliana
NNWNNDGATAAGRWHDNN
NNHDWYCTTATCHNNWNN		 Dap-seq
OMalley et al.(2016)
At3g11280_colamp_a 		0.736 0.819
AT5G58900
M07146_2.00 		Arabidopsis thaliana
HHWWYCTTATCYWHW
WDWRGATAAGRWWDD		 Dap-seq
OMalley et al.(2016)
At5g58900_col_a 		0.725 0.766
AT5G58900
M07147_2.00 		Arabidopsis thaliana
HWYMTTATCHWNWWH
DWWNWDGATAAKRWD		 Dap-seq
OMalley et al.(2016)
At5g58900_colamp_a 		0.725 0.766
PK27213.1
M01284_2.00 		Cannabis sativa
NHWATCNNNN
NNNNGATWDN		 PBM
Lambert et al.(2019)
pTH10196 		0.710 0.777
PK27213.1
M02356_2.00 		Cannabis sativa
NHHATCNNNN
NNNNGATDDN		 PBM
Weirauch et al.(2014)
pTH9600 		0.710 0.777
AT2G38090
M07055_2.00 		Arabidopsis thaliana
HHBAWNYTTATCYWNWHYNBN
NVNRDWNWRGATAARNWTVDD		 Dap-seq
OMalley et al.(2016)
At2g38090_col_a 		0.678 0.766
PK27693.1
M01285_2.00 		Cannabis sativa
NNYTATCBNN
NNVGATARNN		 PBM
Lambert et al.(2019)
pTH11302 		0.663 0.777
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10009884 Myb 124 171

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPPG_03931 Spizellomyces punctatus SPPG_03931 I
KNAG_0A05600 Kazachstania naganishii KNAG_0A05600 I
SCHCODRAFT_238623 Schizophyllum commune SCHCODRAFT_238623 I
PLEOSDRAFT_1075550 Pleurotus ostreatus PLEOSDRAFT_1075550 I
FIBRA_04336 Fibroporia radiculosa FIBRA_04336 I
K443DRAFT_105165 Laccaria amethystina K443DRAFT_105165 I
PISMIDRAFT_671894 Pisolithus microcarpus PISMIDRAFT_671894 N
M407DRAFT_128179 Tulasnella calospora M407DRAFT_128179 N
M413DRAFT_6767 Hebeloma cylindrosporum M413DRAFT_6767 N
PAXRUDRAFT_824657 Paxillus rubicundulus PAXRUDRAFT_824657 N
PHACADRAFT_204947 Phanerochaete carnosa PHACADRAFT_204947 N
PHLGIDRAFT_50338 Phlebiopsis gigantea PHLGIDRAFT_50338 N
LACBIDRAFT_297628 Laccaria bicolor LACBIDRAFT_297628 N
POSPLDRAFT_106191 Postia placenta POSPLDRAFT_106191 N
SCLCIDRAFT_119671 Scleroderma citrinum SCLCIDRAFT_119671 N
SERLA73DRAFT_78978 Serpula lacrymans SERLA73DRAFT_78978 N
fgenesh1_pg.C_scaffold_18000074 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_18000074 N
M404DRAFT_137431 Pisolithus tinctorius M404DRAFT_137431 N
M378DRAFT_174679 Amanita muscaria M378DRAFT_174679 N
K443DRAFT_677749 Laccaria amethystina K443DRAFT_677749 N
JAAARDRAFT_44019 Jaapia argillacea JAAARDRAFT_44019 N
HETIRDRAFT_431289 Heterobasidion irregulare HETIRDRAFT_431289 N
GLOTRDRAFT_134845 Gloeophyllum trabeum GLOTRDRAFT_134845 N
GALMADRAFT_132473 Galerina marginata GALMADRAFT_132473 N
CY34DRAFT_810493 Suillus luteus CY34DRAFT_810493 N
CERSUDRAFT_110850 Ceriporiopsis subvermispora CERSUDRAFT_110850 N
CC1G_00612 Coprinopsis cinerea CC1G_00612 N
BOTBODRAFT_56815 Botryobasidium botryosum BOTBODRAFT_56815 N
BN946_scf184867.g15 Trametes cinnabarina BN946_scf184867.g15 N
AGABI2DRAFT_189288 Agaricus bisporus AGABI2DRAFT_189288 N