Lus10024385.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10024385.g T288059_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.909 0.979
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.901 0.957
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.901 0.957
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.891 0.957
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.849 0.957
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10024385 Myb 562 612

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
STAT2 Homo sapiens ENSG00000170581 D
Stat2 Mus musculus ENSMUSG00000040033 D
STAT2 Myotis lucifugus ENSMLUG00000006785 I
Myotis_brandtii_STAT2_10009187 Myotis brandtii Myotis_brandtii_STAT2_10009187 I
ENSP00000315768 Macaca fascicularis ENSP00000315768 I
ENSBTAP00000005749-D1 Bos grunniens ENSBTAP00000005749-D1 I
ENSSTOG00000015985 Ictidomys tridecemlineatus ENSSTOG00000015985 I
Stat2 Rattus norvegicus ENSRNOG00000031081 I
STAT2 Pan troglodytes ENSPTRG00000005095 I
STAT2 Procavia capensis ENSPCAG00000007855 I
ENSPANG00000012539 Papio anubis ENSPANG00000012539 I
STAT2 Otolemur garnettii ENSOGAG00000001538 I
ENSOARG00000009154 Ovis aries ENSOARG00000009154 I
ENSNLEG00000017494 Nomascus leucogenys ENSNLEG00000017494 I
ENSMPUG00000001431 Mustela putorius furo ENSMPUG00000001431 I
STAT2 Macaca mulatta ENSMMUG00000000803 I
ENSAMEG00000003886 Ailuropoda melanoleuca ENSAMEG00000003886 I
STAT2 Loxodonta africana ENSLAFG00000014890 I
STAT2 Gorilla gorilla ENSGGOG00000006127 I
STAT2 Felis catus ENSFCAG00000012023 I
STAT2 Equus caballus ENSECAG00000022326 I
Stat2 Dipodomys ordii ENSDORG00000012958 I
STAT2 Dasypus novemcinctus ENSDNOG00000011002 I
ENSCSAG00000005161 Chlorocebus sabaeus ENSCSAG00000005161 I
STAT2 Cavia porcellus ENSCPOG00000014930 I
ENSCJAG00000011101 Callithrix jacchus ENSCJAG00000011101 I
ENSCAFG00000017707 Canis familiaris ENSCAFG00000017707 I
ENSCAFG00000000121 Canis familiaris ENSCAFG00000000121 I
STAT2 Bos taurus ENSBTAG00000004380 I