MDP0000132832 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000132832 T288288_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KUA1
M02312_2.00 		Arabidopsis thaliana
NNTTATCCDN
NHGGATAANN		 PBM
Weirauch et al.(2014)
pTH7647 		0.881 0.936
KUA1
M07136_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWW
WWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a 		0.881 0.936
KUA1
M07137_2.00 		Arabidopsis thaliana
HHWDYHTTATCCAHW
WDTGGATAADRHWDD		 Dap-seq
OMalley et al.(2016)
At5g47390_col_b 		0.881 0.936
PK00738.1
M02346_2.00 		Cannabis sativa
NYWATCYDNN
NNHRGATWRN		 PBM
Weirauch et al.(2014)
pTH9487 		0.880 0.915
AT5G61620
M07149_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWWN
NWWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
AT5G61620_col_a 		0.842 0.894
AT5G61620
M07150_2.00 		Arabidopsis thaliana
YHTTATCCAHW
WDTGGATAADR		 Dap-seq
OMalley et al.(2016)
AT5G61620_colamp_a 		0.842 0.894
PK29550.1
M02358_2.00 		Cannabis sativa
NNHDATCYNN
NNRGATHDNN		 PBM
Weirauch et al.(2014)
pTH9595 		0.831 0.915
fgenesh1_pg.scaffold_70000111
M02342_2.00 		Physcomitrella patens
NNHNATCBN
NVGATNDNN		 PBM
Weirauch et al.(2014)
pTH8492 		0.822 0.872
AT3G16350
M01078_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Sullivan et al.(2014)
pTH7149 		0.821 0.872
PK17526.1
M02353_2.00 		Cannabis sativa
NNTTATCCAN
NTGGATAANN		 PBM
Weirauch et al.(2014)
pTH9588 		0.804 0.851
PK23829.1
M02355_2.00 		Cannabis sativa
VTTATCCD
HGGATAAB		 PBM
Weirauch et al.(2014)
pTH9592 		0.793 0.809
AT1G19000
M02287_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Weirauch et al.(2014)
pTH7120 		0.780 0.787
AT1G19000
M07012_2.00 		Arabidopsis thaliana
HDYHTTATCCAHWW
WWDTGGATAADRHD		 Dap-seq
OMalley et al.(2016)
At1g19000_col_a 		0.780 0.787
AT1G19000
M07013_2.00 		Arabidopsis thaliana
WDYNTTATCCAHWW
WWDTGGATAANRHW		 Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a 		0.780 0.787
0600010132
M02360_2.00 		Ostreococcus tauri
NNVTTATCCDNNN
NNNHGGATAABNN		 PBM
Weirauch et al.(2014)
pTH9441 		0.773 0.851
AT5G56840
M07144_2.00 		Arabidopsis thaliana
WWYMTTATCCAWWWN
NWWWTGGATAAKRWW		 Dap-seq
OMalley et al.(2016)
AT5G56840_col_a 		0.761 0.809
AT5G56840
M07145_2.00 		Arabidopsis thaliana
HHHWWYHTTATCCWHW
WDWGGATAADRWWDDD		 Dap-seq
OMalley et al.(2016)
AT5G56840_colamp_a 		0.761 0.809
AT3G10580
M07072_2.00 		Arabidopsis thaliana
AWBCTTATCYWHWHH
DDWDWRGATAAGVWT		 Dap-seq
OMalley et al.(2016)
AT3G10580_col_a 		0.699 0.660
AT3G10580
M07073_2.00 		Arabidopsis thaliana
CCGAWAAWNTCGGDD
HHCCGANWTTWTCGG		 Dap-seq
OMalley et al.(2016)
AT3G10580_colamp_a 		0.699 0.660
AT1G74840
M02291_2.00 		Arabidopsis thaliana
NGWTATCCRNN
NNYGGATAWCN		 PBM
Weirauch et al.(2014)
pTH7074 		0.684 0.766
AT1G74840
M07037_2.00 		Arabidopsis thaliana
HHTTATCCAHW
WDTGGATAADD		 Dap-seq
OMalley et al.(2016)
At1g74840_col100_a 		0.684 0.766
AT1G74840
M07038_2.00 		Arabidopsis thaliana
HWNHTTATCCAHWW
WWDTGGATAADNWD		 Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a 		0.684 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000132832 Myb 210 257

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

585 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HMBOX1 Homo sapiens ENSG00000147421 D
Hmbox1 Mus musculus ENSMUSG00000021972 D
ENSPFOG00000017886 Poecilia formosa ENSPFOG00000017886 I
hmbox1b Takifugu rubripes ENSTRUG00000004378 I
zgc:91944 Tetraodon nigroviridis ENSTNIG00000014025 I
hmbox1a Tetraodon nigroviridis ENSTNIG00000011904 I
hnf1a Tetraodon nigroviridis ENSTNIG00000011468 I
HMBOX1 Taeniopygia guttata ENSTGUG00000013324 I
HMBOX1 Sus scrofa ENSSSCG00000009682 I
ENSSHAG00000016211 Sarcophilus harrisii ENSSHAG00000016211 I
Hmbox1 Rattus norvegicus ENSRNOG00000013326 I
HMBOX1 Pan troglodytes ENSPTRG00000020127 I
ENSPSIG00000016826 Pelodiscus sinensis ENSPSIG00000016826 I
ENSPPYG00000018480 Pongo abelii ENSPPYG00000018480 I
zgc:91944 Takifugu rubripes ENSTRUG00000012550 I
ENSPFOG00000013053 Poecilia formosa ENSPFOG00000013053 I
ENSPFOG00000012263 Poecilia formosa ENSPFOG00000012263 I
ENSPFOG00000000843 Poecilia formosa ENSPFOG00000000843 I
HMBOX1 Procavia capensis ENSPCAG00000012005 I
ENSPANG00000014537 Papio anubis ENSPANG00000014537 I
zgc:91944 Oryzias latipes ENSORLG00000020883 I
ENSORLG00000018971 Oryzias latipes ENSORLG00000018971 I
hmbox1b Oryzias latipes ENSORLG00000016242 I
hmbox1a Oryzias latipes ENSORLG00000014467 I
ENSONIG00000011178 Oreochromis niloticus ENSONIG00000011178 I
SPU_022737 Strongylocentrotus purpuratus SPU_022737 I
hmbox1.S Xenopus laevis XB-GENE-6078482 I
fgenesh2_pg.scaffold_505000025 Branchiostoma floridae fgenesh2_pg.scaffold_505000025 I
Myotis_brandtii_HMBOX1_10012332 Myotis brandtii Myotis_brandtii_HMBOX1_10012332 I
Gfo_R008926 Geospiza fortis Gfo_R008926 I
ENSP00000401769 Macaca fascicularis ENSP00000401769 I
ENSP00000401769-D1 Bos grunniens ENSP00000401769-D1 I
Cmyd_10005786 Chelonia mydas Cmyd_10005786 I
Brh_R012838 Buceros rhinoceros Brh_R012838 I
Afo_R011837 Aptenodytes forsteri Afo_R011837 I
Aan_R010756 Calypte anna Aan_R010756 I
TriadG28952 Trichoplax adhaerens TriadG28952 I
hmbox1a Takifugu rubripes ENSTRUG00000006366 I
SPU_002791 Strongylocentrotus purpuratus SPU_002791 I
Q4S8E1_TETNG Tetraodon nigroviridis Q4S8E1_TETNG I
HelroG166133 Helobdella robusta HelroG166133 I
ENSXMAG00000011675 Xiphophorus maculatus ENSXMAG00000011675 I
ENSXMAG00000005730 Xiphophorus maculatus ENSXMAG00000005730 I
ENSXMAG00000003472 Xiphophorus maculatus ENSXMAG00000003472 I
ENSXMAG00000001795 Xiphophorus maculatus ENSXMAG00000001795 I
HMBOX1 Tursiops truncatus ENSTTRG00000015467 I
ENSTSYG00000001109 Tarsius syrichta ENSTSYG00000001109 I
hnf1a Takifugu rubripes ENSTRUG00000016222 I
ENSONIG00000003040 Oreochromis niloticus ENSONIG00000003040 I
ENSCSAG00000015894 Chlorocebus sabaeus ENSCSAG00000015894 I
hmbox1b Gasterosteus aculeatus ENSGACG00000004391 I
HMBOX1 Felis catus ENSFCAG00000022672 I
ENSFALG00000010859 Ficedula albicollis ENSFALG00000010859 I
HMBOX1 Equus caballus ENSECAG00000008240 I
HMBOX1 Dasypus novemcinctus ENSDNOG00000031840 I
zgc:91944 Danio rerio ENSDARG00000035887 I
hmbox1a Danio rerio ENSDARG00000027082 I
hmbox1b Danio rerio ENSDARG00000018913 I
hnf1a Danio rerio ENSDARG00000009470 I
ENSCSAVG00000009827 Ciona savignyi ENSCSAVG00000009827 I
ENSCSAVG00000002486 Ciona savignyi ENSCSAVG00000002486 I
zgc:91944 Gasterosteus aculeatus ENSGACG00000009223 I
HMBOX1 Cavia porcellus ENSCPOG00000011124 I
HMBOX1 Callithrix jacchus ENSCJAG00000015654 I
ENSCING00000007645 Ciona intestinalis ENSCING00000007645 I
HMBOX1 Choloepus hoffmanni ENSCHOG00000005538 I
HMBOX1 Canis familiaris ENSCAFG00000008237 I
HMBOX1 Bos taurus ENSBTAG00000010819 I
ENSAPLG00000006003 Anas platyrhynchos ENSAPLG00000006003 I
ENSAMXG00000018539 Astyanax mexicanus ENSAMXG00000018539 I
ENSAMXG00000011241 Astyanax mexicanus ENSAMXG00000011241 I
ENSAMEG00000016028 Ailuropoda melanoleuca ENSAMEG00000016028 I
HMBOX1 Anolis carolinensis ENSACAG00000010160 I
ENSLOCG00000015994 Lepisosteus oculatus ENSLOCG00000015994 I
CapteG124171 Capitella teleta CapteG124171 I
ENSONIG00000001328 Oreochromis niloticus ENSONIG00000001328 I
HMBOX1 Otolemur garnettii ENSOGAG00000001381 I
HMBOX1 Oryctolagus cuniculus ENSOCUG00000017211 I
ENSOARG00000015036 Ovis aries ENSOARG00000015036 I
ENSNLEG00000016701 Nomascus leucogenys ENSNLEG00000016701 I
ENSMPUG00000001070 Mustela putorius furo ENSMPUG00000001070 I
HMBOX1 Monodelphis domestica ENSMODG00000008788 I
HMBOX1 Macaca mulatta ENSMMUG00000014981 I
HMBOX1 Myotis lucifugus ENSMLUG00000007478 I
ENSMEUG00000015023 Macropus eugenii ENSMEUG00000015023 I
ENSONIG00000007704 Oreochromis niloticus ENSONIG00000007704 I
ENSLOCG00000001916 Lepisosteus oculatus ENSLOCG00000001916 I
HMBOX1 Loxodonta africana ENSLAFG00000032318 I
ENSLACG00000011304 Latimeria chalumnae ENSLACG00000011304 I
ENSGMOG00000006872 Gadus morhua ENSGMOG00000006872 I
ENSGMOG00000004622 Gadus morhua ENSGMOG00000004622 I
ENSGMOG00000002742 Gadus morhua ENSGMOG00000002742 I
HMBOX1 Gorilla gorilla ENSGGOG00000000860 I
HMBOX1 Gallus gallus ENSGALG00000016633 I
hmbox1a Gasterosteus aculeatus ENSGACG00000014814 I
hnf1a Gasterosteus aculeatus ENSGACG00000012691 I