Pavir.J30777 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J30777 T289446_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J30777.1.p Myb 52 95
Pavir.J30777.2.p Myb 35 78

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRIUR3_10842 Triticum urartu TRIUR3_10842 N 0.873
ORUFI01G25760 Oryza rufipogon ORUFI01G25760 N 0.746
ORUFI01G25800 Oryza rufipogon ORUFI01G25800 N 0.775
POPTR_0012s01420 Populus trichocarpa POPTR_0012s01420 N 0.678
POPTR_0015s02310 Populus trichocarpa POPTR_0015s02310 N 0.668
Sb03g028170 Sorghum bicolor Sb03g028170 N 0.909
TCM_015351 Theobroma cacao TCM_015351 N 0.661
TRAES3BF020200120CFD_g Triticum aestivum TRAES3BF020200120CFD_g N 0.873
Traes_3DL_30CF35BB3 Triticum aestivum Traes_3DL_30CF35BB3 N 0.873
ORGLA01G0184700 Oryza glaberrima ORGLA01G0184700 N 0.746
Aquca_028_00182 Aquilegia coerulea Aquca_028_00182 N 0.682
Ciclev10006315m.g Citrus clementina Ciclev10006315m.g N 0.699
Eucgr.E00851 Eucalyptus grandis Eucgr.E00851 N 0.684
Lus10005949.g Linum usitatissimum Lus10005949.g N 0.661
Pavir.Eb02165 Panicum virgatum Pavir.Eb02165 N 0.909
SapurV1A.0013s0580 Salix purpurea SapurV1A.0013s0580 N 0.661
OB01G32480 Oryza brachyantha OB01G32480 N 0.733
BGIOSGA001193 Oryza indica BGIOSGA001193 N 0.746
Bo9g003750 Brassica oleracea Bo9g003750 N 0.718
Bra037388 Brassica rapa Bra037388 N 0.718
GRMZM2G057955 Zea mays GRMZM2G057955 N 0.909
LPERR01G19720 Leersia perrieri LPERR01G19720 N 0.794
LPERR01G19750 Leersia perrieri LPERR01G19750 N 0.775
MLOC_68772 Hordeum vulgare MLOC_68772 N 0.880
OB01G32460 Oryza brachyantha OB01G32460 N 0.727
BGIOSGA001192 Oryza indica BGIOSGA001192 N 0.775
OBART01G22950 Oryza barthii OBART01G22950 N 0.746
OBART01G22980 Oryza barthii OBART01G22980 N 0.775
OGLUM01G26700 Oryza glumaepatula OGLUM01G26700 N 0.746
OGLUM01G26760 Oryza glumaepatula OGLUM01G26760 N 0.775
OLONG_010128 Oryza longistaminata OLONG_010128 N 0.775
OMERI01G21040 Oryza meridionalis OMERI01G21040 N 0.705
OPUNC01G23150 Oryza punctata OPUNC01G23150 N 0.774