PK06515.1 (Cannabis sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PK06515.1 T290365_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.909 1.000
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.909 1.000
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.909 1.000
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.909 0.978
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.909 0.978
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.901 0.957
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.891 0.935
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.891 0.935
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.891 0.935
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.818 0.891
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.795 0.870
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.795 0.870
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.795 0.870
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.706 0.717
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.670 0.674
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.670 0.674
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.670 0.674
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK06515.1 Myb 55 100

Links

Other Myb/SANT family TFs
Other Cannabis sativa TFs

334 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANIA_10120 Aspergillus nidulans CADANIAG00001891 D 0.000
PMAA_065570 Talaromyces marneffei PMAA_065570 I 0.000
CIMG_03190 Coccidioides immitis CIMG_03190 I 0.000
MYCFIDRAFT_140661 Pseudocercospora fijiensis MYCFIDRAFT_140661 I 0.000
PAAG_12029 Paracoccidioides sp lutzii PAAG_12029 I 0.000
PABG_06000 Paracoccidioides brasiliensis PABG_06000 I 0.000
PCH_Pc16g12950 Penicillium rubens PCH_Pc16g12950 I 0.000
PDE_00300 Penicillium oxalicum PDE_00300 I 0.000
PDIP_66730 Penicillium digitatum PDIP_66730 I 0.000
PEX1_010850 Penicillium expansum PEX1_010850 I 0.000
PITC_091680 Penicillium italicum PITC_091680 I 0.000
MBM_04933 Marssonina brunnea MBM_04933 I 0.000
PVAR5_4079 Byssochlamys spectabilis PVAR5_4079 I 0.000
TSTA_085600 Talaromyces stipitatus TSTA_085600 I 0.000
U727_00432720241 Penicillium solitum U727_00432720241 I 0.000
gw1.6.805.1 Mycosphaerella graminicola gw1.6.805.1 I 0.000
fgenesh1_pm.00042_#_235 Aspergillus carbonarius fgenesh1_pm.00042_#_235 I 0.000
Pc16g12950 Penicillium chrysogenum Pc16g12950 I 0.000
PMAA_065570 Penicillium marneffei PMAA_065570 I 0.000
ATEG_00638 Aspergillus terreus CADATEAG00009286 I 0.000
AUEXF2481DRAFT_183957 Aureobasidium subglaciale AUEXF2481DRAFT_183957 I 0.000
BDDG_03741 Blastomyces dermatitidis BDDG_03741 I 0.000
ACLA_021050 Aspergillus clavatus CADACLAG00002292 I 0.000
CADAFLAG00005530 Aspergillus flavus CADAFLAG00005530 I 0.000
AFUA_1G14360 Aspergillus fumigatus CADAFUAG00007111 I 0.000
CADANGAG00001240 Aspergillus niger CADANGAG00001240 I 0.000
CADAORAG00005134 Aspergillus oryzae CADAORAG00005134 I 0.000
M438DRAFT_276450 Aureobasidium pullulans M438DRAFT_276450 I 0.000
EPUS_07650 Endocarpon pusillum EPUS_07650 I 0.000
EURHEDRAFT_447655 Aspergillus ruber EURHEDRAFT_447655 I 0.000
HCBG_01404 Histoplasma capsulatum HCBG_01404 I 0.000
M437DRAFT_18298 Aureobasidium melanogenum M437DRAFT_18298 I 0.000
CNI01500 Cryptococcus neoformans CNI01500 N 0.000
EV44_g5837 Erysiphe necator EV44_g5837 N 0.000
UV8b_1142 Ustilaginoidea virens UV8b_1142 N 0.000
JAAARDRAFT_43035 Jaapia argillacea JAAARDRAFT_43035 N 0.000
BGHDH14_bgh03978 Blumeria graminis BGHDH14_bgh03978 N 0.000
OIDMADRAFT_134351 Oidiodendron maius OIDMADRAFT_134351 N 0.000