CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NAC007
(
Arabidopsis thaliana
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
AT1G12260
T292016_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC007
M07164_2.00
Arabidopsis thaliana
TTRCKTVHDNNNYAMG
CKTRNNNHDBAMGYAA
Dap-seq
OMalley et al.(2016)
VND4_colamp_a
(Direct)
(Direct)
NAC007
M07165_2.00
Arabidopsis thaliana
TGCKTVHDNHDYAMG
CKTRHDNHDBAMGCA
Dap-seq
OMalley et al.(2016)
VND4_col
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC037
M07187_2.00
Arabidopsis thaliana
CKTVNDNHNYAMG
CKTRNDNHNBAMG
Dap-seq
OMalley et al.(2016)
VND1_col_a
0.932
0.842
ANAC076
M07224_2.00
Arabidopsis thaliana
TRCKTVHNNHNYAMG
CKTRNDNNDBAMGYA
Dap-seq
OMalley et al.(2016)
VND2_col_a
0.928
0.842
ANAC076
M07225_2.00
Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN
NNNDTDRCKTRNDNNDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND2_colamp_a
0.928
0.842
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G12260.1
NAC/NAM
8
135
PPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGHEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRL
AT1G12260.2
NAC/NAM
8
135
PPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGHEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Arabidopsis thaliana
TFs
296 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MAC_06906
Metarhizium acridum
MAC_06906
N
0.000
fgenesh1_pg.sca_5_chr5_3_0000045
Nectria haematococca
fgenesh1_pg.sca_5_chr5_3_0000045
N
0.000
X797_008065
Metarhizium robertsii
X797_008065
N
0.000
VHEMI08725
Torrubiella hemipterigena
VHEMI08725
N
0.000
VDBG_04268
Verticillium alfalfae
VDBG_04268
N
0.000
VDAG_01498
Verticillium dahliae
VDAG_01498
N
0.000
TRIVIDRAFT_211762
Trichoderma virens
TRIVIDRAFT_211762
N
0.000
TRIREDRAFT_67209
Trichoderma reesei
TRIREDRAFT_67209
N
0.000
TRIATDRAFT_292891
Trichoderma atroviride
TRIATDRAFT_292891
N
0.000
NechaG80246
Fusarium solani
NechaG80246
N
0.000
MGU_07007
Metarhizium guizhouense
MGU_07007
N
0.000
MBR_08437
Metarhizium brunneum
MBR_08437
N
0.000
MANI_011101
Metarhizium anisopliae
MANI_011101
N
0.000
MAJ_07028
Metarhizium majus
MAJ_07028
N
0.000
BBA_06158
Beauveria bassiana
BBA_06158
N
0.000
GLRG_03524
Colletotrichum graminicola
GLRG_03524
N
0.000
FVEG_02737
Fusarium verticillioides
FVEG_02737
N
0.000
FPSE_03918
Fusarium pseudograminearum
FPSE_03918
N
0.000
FOXG_05391
Fusarium oxysporum
FOXG_05391
N
0.000
FGRRES_17302
Fusarium graminearum
FGRRES_17302
N
0.000
FFUJ_07433
Fusarium fujikuroi
FFUJ_07433
N
0.000
CSUB01_03246
Colletotrichum sublineola
CSUB01_03246
N
0.000
CPUR_03067
Claviceps purpurea
CPUR_03067
N
0.000
Cob_11006
Colletotrichum orbiculare
Cob_11006
N
0.000
CH063_08290
Colletotrichum higginsianum
CH063_08290
N
0.000
CGGC5_4581
Colletotrichum gloeosporioides
CGGC5_4581
N
0.000
CFIO01_12131
Colletotrichum fioriniae
CFIO01_12131
N
0.000
CCM_08431
Cordyceps militaris
CCM_08431
N
0.000