CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra002018
(
Brassica rapa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bra002018
T292516_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra002018.1-P
NAC/NAM
41
168
LPGFRFHPTEEELLDFYLKNTVYGKRCKVEVIGFLNIYGHDPWDLPRLSTIGEREWYFLVPRERKHGDGGRPSRITEKGYWKATGSDRKIISSSEPKRMIGLKKTLVFYTGRAPGGTKTDWVMNEFRM
Links
Other
NAC/NAM
family TFs
Other
Brassica rapa
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gtf2ird2
Mus musculus
ENSMUSG00000015942
N
gtf2i
Xenopus tropicalis
XB-GENE-1217437
N
Myotis_brandtii_GTF2IRD2_10014292
Myotis brandtii
Myotis_brandtii_GTF2IRD2_10014292
N
ENSP00000393677
Macaca fascicularis
ENSP00000393677
N
ENSBTAP00000012908-D1
Bos grunniens
ENSBTAP00000012908-D1
N
ENSSSCG00000028635
Sus scrofa
ENSSSCG00000028635
N
ENSPVAG00000005368
Pteropus vampyrus
ENSPVAG00000005368
N
ENSPTRG00000019295
Pan troglodytes
ENSPTRG00000019295
N
ENSPPYG00000017480
Pongo abelii
ENSPPYG00000017480
N
ENSPANG00000018076
Papio anubis
ENSPANG00000018076
N
ENSOGAG00000000844
Otolemur garnettii
ENSOGAG00000000844
N
ENSOCUG00000022131
Oryctolagus cuniculus
ENSOCUG00000022131
N
ENSOARG00000010976
Ovis aries
ENSOARG00000010976
N
ENSAMEG00000015146
Ailuropoda melanoleuca
ENSAMEG00000015146
N
ENSMPUG00000016180
Mustela putorius furo
ENSMPUG00000016180
N
ENSMLUG00000024497
Myotis lucifugus
ENSMLUG00000024497
N
ENSLAFG00000013081
Loxodonta africana
ENSLAFG00000013081
N
GTF2IRD2
Homo sapiens
ENSG00000196275
N
GTF2IRD2B
Homo sapiens
ENSG00000174428
N
ENSECAG00000021592
Equus caballus
ENSECAG00000021592
N
ENSDNOG00000046682
Dasypus novemcinctus
ENSDNOG00000046682
N
ENSDNOG00000043641
Dasypus novemcinctus
ENSDNOG00000043641
N
ENSCSAG00000018260
Chlorocebus sabaeus
ENSCSAG00000018260
N
ENSCPOG00000022638
Cavia porcellus
ENSCPOG00000022638
N
ENSCAFG00000011367
Canis familiaris
ENSCAFG00000011367
N
ENSBTAG00000026286
Bos taurus
ENSBTAG00000026286
N