Bra004385 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra004385 T292532_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC029
M00973_2.00 		Arabidopsis thaliana
NBACGBMWNN
NNWKVCGTVN		 PBM
Lindemose et al.(2014)
NAP 		0.967 0.973
NAC029
M02369_2.00 		Arabidopsis thaliana
NRGTCAWNN
NNWTGACYN		 PBM
Weirauch et al.(2014)
pTH8397 		0.967 0.973
NAC029
M07180_2.00 		Arabidopsis thaliana
NCGTVHNNNWYACGBMA
TKVCGTRWNNNDBACGN		 Dap-seq
OMalley et al.(2016)
NAP_colamp_a 		0.967 0.973
NAC029
M07181_2.00 		Arabidopsis thaliana
WYACGBMAYYD
HRRTKVCGTRW		 Dap-seq
OMalley et al.(2016)
NAP_col_v3a 		0.967 0.973
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra004385.1-P NAC/NAM 10 134

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
KLLA0_D07029g Kluyveromyces lactis KLLA0_D07029g N 0.000
PaG_00114 Pseudozyma aphidis PaG_00114 N 0.000
PSEUBRA_SCAF12g01696 Pseudozyma brasiliensis PSEUBRA_SCAF12g01696 N 0.000
UM04999 Ustilago maydis UM04999 N 0.000
Kwal_8662 Kluyveromyces waltii Kwal_8662 N 0.000