CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra006019
(
Brassica rapa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bra006019
T292541_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra006019.1-P
NAC/NAM
7
147
APGFRFHPTDVELVRYYLKRKVLGKKLLVDAIVEIDIYKFEPSDLPDKSYIKSGDLKWHFFCPREKKYATGVRANRATEGGYWKTTGKERAVLLEDKVLTQKNIPQDTYVLCVLFKKDGPGPRNGAQYGAPFNEEDWSDQE
Links
Other
NAC/NAM
family TFs
Other
Brassica rapa
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
hoxd13a
Danio rerio
ENSDARG00000059256
D
HOXA13
Homo sapiens
ENSG00000106031
D
HOXC13
Homo sapiens
ENSG00000123364
D
Hoxc13
Mus musculus
ENSMUSG00000001655
D
Hoxa13
Mus musculus
ENSMUSG00000038203
D
HOXA13
Anolis carolinensis
ENSACAG00000010302
I
HOXC13
Anolis carolinensis
ENSACAG00000010829
I
ENSACAG00000017915
Anolis carolinensis
ENSACAG00000017915
I
ENSAMEG00000000661
Ailuropoda melanoleuca
ENSAMEG00000000661
I
ENSAMEG00000001865
Ailuropoda melanoleuca
ENSAMEG00000001865
I
ENSAMEG00000005877
Ailuropoda melanoleuca
ENSAMEG00000005877
I
ENSAMXG00000000621
Astyanax mexicanus
ENSAMXG00000000621
I
ENSAMXG00000005151
Astyanax mexicanus
ENSAMXG00000005151
I
ENSAMXG00000009345
Astyanax mexicanus
ENSAMXG00000009345
I
ENSAMXG00000024685
Astyanax mexicanus
ENSAMXG00000024685
I
ENSAPLG00000007333
Anas platyrhynchos
ENSAPLG00000007333
I
ENSAPLG00000008742
Anas platyrhynchos
ENSAPLG00000008742
I
ENSAPLG00000013598
Anas platyrhynchos
ENSAPLG00000013598
I
HOXC13
Bos taurus
ENSBTAG00000000923
I
HOXD13
Bos taurus
ENSBTAG00000004313
I
HOXA13
Bos taurus
ENSBTAG00000014735
I
HOXA13
Canis familiaris
ENSCAFG00000002970
I
HOXC13
Canis familiaris
ENSCAFG00000006648
I
ENSCHOG00000004807
Choloepus hoffmanni
ENSCHOG00000004807
I
ENSCJAG00000008192
Callithrix jacchus
ENSCJAG00000008192
I
HOXD13
Callithrix jacchus
ENSCJAG00000008250
I
HOXC13
Callithrix jacchus
ENSCJAG00000018800
I
HOXD13
Cavia porcellus
ENSCPOG00000006722
I
HOXC13
Cavia porcellus
ENSCPOG00000020390
I
ENSCPOG00000024869
Cavia porcellus
ENSCPOG00000024869
I
ENSCSAG00000005461
Chlorocebus sabaeus
ENSCSAG00000005461
I
ENSCSAG00000014315
Chlorocebus sabaeus
ENSCSAG00000014315
I
ENSCSAG00000014475
Chlorocebus sabaeus
ENSCSAG00000014475
I
hoxa13b
Danio rerio
ENSDARG00000036254
I
hoxc13a
Danio rerio
ENSDARG00000070353
I
hoxc13b
Danio rerio
ENSDARG00000090023
I
hoxa13a
Danio rerio
ENSDARG00000100312
I
HOXA13
Dasypus novemcinctus
ENSDNOG00000047528
I
ENSDORG00000006328
Dipodomys ordii
ENSDORG00000006328
I
ENSECAG00000014192
Equus caballus
ENSECAG00000014192
I
HOXC13
Equus caballus
ENSECAG00000024867
I
ENSETEG00000006794
Echinops telfairi
ENSETEG00000006794
I
ENSFALG00000009407
Ficedula albicollis
ENSFALG00000009407
I
ENSFALG00000014896
Ficedula albicollis
ENSFALG00000014896
I
ENSFCAG00000027459
Felis catus
ENSFCAG00000027459
I
ENSFCAG00000028938
Felis catus
ENSFCAG00000028938
I
hoxa13a
Gasterosteus aculeatus
ENSGACG00000007134
I
hoxa13b
Gasterosteus aculeatus
ENSGACG00000008296
I
hoxc13a
Gasterosteus aculeatus
ENSGACG00000009389
I
ENSGALG00000001543
Gallus gallus
ENSGALG00000001543
I
ENSGALG00000023129
Gallus gallus
ENSGALG00000023129
I
HOXA13
Gallus gallus
ENSGALG00000027234
I
ENSGALG00000027515
Gallus gallus
ENSGALG00000027515
I
HOXA13
Gorilla gorilla
ENSGGOG00000005309
I
HOXC13
Gorilla gorilla
ENSGGOG00000015765
I
ENSGMOG00000005714
Gadus morhua
ENSGMOG00000005714
I
ENSGMOG00000013892
Gadus morhua
ENSGMOG00000013892
I
ENSGMOG00000017858
Gadus morhua
ENSGMOG00000017858
I
ENSLACG00000016784
Latimeria chalumnae
ENSLACG00000016784
I
ENSLACG00000017423
Latimeria chalumnae
ENSLACG00000017423
I
ENSLAFG00000000738
Loxodonta africana
ENSLAFG00000000738
I
HOXC13
Loxodonta africana
ENSLAFG00000030195
I
ENSLOCG00000006295
Lepisosteus oculatus
ENSLOCG00000006295
I
ENSLOCG00000011842
Lepisosteus oculatus
ENSLOCG00000011842
I
ENSMICG00000000502
Microcebus murinus
ENSMICG00000000502
I
HOXA13
Myotis lucifugus
ENSMLUG00000008332
I
HOXC13
Myotis lucifugus
ENSMLUG00000015050
I
ENSMMUG00000004542
Macaca mulatta
ENSMMUG00000004542
I
HOXA13
Macaca mulatta
ENSMMUG00000013463
I
HOXA13
Monodelphis domestica
ENSMODG00000000449
I
ENSMPUG00000004851
Mustela putorius furo
ENSMPUG00000004851
I
ENSMPUG00000005890
Mustela putorius furo
ENSMPUG00000005890
I
ENSNLEG00000014997
Nomascus leucogenys
ENSNLEG00000014997
I
HOXA13
Ornithorhynchus anatinus
ENSOANG00000009173
I
ENSOANG00000015090
Ornithorhynchus anatinus
ENSOANG00000015090
I
ENSOARG00000009550
Ovis aries
ENSOARG00000009550
I
ENSOARG00000016363
Ovis aries
ENSOARG00000016363
I
HOXC13
Oryctolagus cuniculus
ENSOCUG00000001156
I
ENSOCUG00000024694
Oryctolagus cuniculus
ENSOCUG00000024694
I
HOXA13
Otolemur garnettii
ENSOGAG00000028983
I
HOXC13
Otolemur garnettii
ENSOGAG00000030391
I
ENSONIG00000002962
Oreochromis niloticus
ENSONIG00000002962
I
ENSONIG00000004601
Oreochromis niloticus
ENSONIG00000004601
I
ENSONIG00000012232
Oreochromis niloticus
ENSONIG00000012232
I
HOXC13
Ochotona princeps
ENSOPRG00000006077
I
ENSOPRG00000010498
Ochotona princeps
ENSOPRG00000010498
I
hoxa13a
Oryzias latipes
ENSORLG00000005043
I
hoxa13b
Oryzias latipes
ENSORLG00000007597
I
hoxc13a
Oryzias latipes
ENSORLG00000007896
I
ENSPANG00000002383
Papio anubis
ENSPANG00000002383
I
ENSPANG00000020537
Papio anubis
ENSPANG00000020537
I
ENSPFOG00000002100
Poecilia formosa
ENSPFOG00000002100
I
ENSPFOG00000002494
Poecilia formosa
ENSPFOG00000002494
I
ENSPFOG00000003827
Poecilia formosa
ENSPFOG00000003827
I
ENSPPYG00000004588
Pongo abelii
ENSPPYG00000004588
I
ENSPPYG00000017697
Pongo abelii
ENSPPYG00000017697
I
HOXC13
Pan troglodytes
ENSPTRG00000005025
I
HOXA13
Pan troglodytes
ENSPTRG00000028643
I
HOXC13
Pteropus vampyrus
ENSPVAG00000012296
I
Hoxc13
Rattus norvegicus
ENSRNOG00000028679
I
Hoxa13
Rattus norvegicus
ENSRNOG00000053148
I
Hoxa13
Rattus norvegicus
ENSRNOG00000057061
I
HOXC13
Sorex araneus
ENSSARG00000005621
I
ENSSHAG00000005971
Sarcophilus harrisii
ENSSHAG00000005971
I
ENSSHAG00000016581
Sarcophilus harrisii
ENSSHAG00000016581
I
HOXC13
Sus scrofa
ENSSSCG00000000279
I
ENSSSCG00000021780
Sus scrofa
ENSSSCG00000021780
I
HOXA13
Sus scrofa
ENSSSCG00000029666
I
ENSSTOG00000029157
Ictidomys tridecemlineatus
ENSSTOG00000029157
I
HOXC13
Tupaia belangeri
ENSTBEG00000016269
I
ENSTGUG00000016958
Taeniopygia guttata
ENSTGUG00000016958
I
hoxc13a
Tetraodon nigroviridis
ENSTNIG00000001774
I
hoxa13b
Tetraodon nigroviridis
ENSTNIG00000001781
I
hoxa13a
Tetraodon nigroviridis
ENSTNIG00000009207
I
hoxc13a
Takifugu rubripes
ENSTRUG00000004383
I
hoxa13b
Takifugu rubripes
ENSTRUG00000015364
I
hoxa13a
Takifugu rubripes
ENSTRUG00000016010
I
ENSTRUG00000018251
Takifugu rubripes
ENSTRUG00000018251
I
HOXC13
Tursiops truncatus
ENSTTRG00000004546
I
ENSXMAG00000001062
Xiphophorus maculatus
ENSXMAG00000001062
I
ENSXMAG00000001641
Xiphophorus maculatus
ENSXMAG00000001641
I
ENSXMAG00000013901
Xiphophorus maculatus
ENSXMAG00000013901
I
Aan_R001091
Calypte anna
Aan_R001091
I
Aan_R012455
Calypte anna
Aan_R012455
I
Aan_R014661
Calypte anna
Aan_R014661
I
Afo_R003391
Aptenodytes forsteri
Afo_R003391
I
Afo_R003417
Aptenodytes forsteri
Afo_R003417
I
Alligator_sinensis_CCG005377.1
Alligator sinensis
Alligator_sinensis_CCG005377.1
I
Brh_R008277
Buceros rhinoceros
Brh_R008277
I
Brh_R008776
Buceros rhinoceros
Brh_R008776
I
Cmyd_10015813
Chelonia mydas
Cmyd_10015813
I
ENSBTAP00000001222-D1
Bos grunniens
ENSBTAP00000001222-D1
I
ENSP00000222753-D1
Bos grunniens
ENSP00000222753-D1
I
ENSP00000222753
Macaca fascicularis
ENSP00000222753
I
Gfo_R015836
Geospiza fortis
Gfo_R015836
I
Myotis_brandtii_HOXC13_10022976
Myotis brandtii
Myotis_brandtii_HOXC13_10022976
I
Ogr02757
Ophisaurus gracilis
Ogr02757
I
Pvit_02704
Pogona vitticeps
Pvit_02704
I
Pvit_07423
Pogona vitticeps
Pvit_07423
I
Tal_R009649
Tyto alba
Tal_R009649
I
Tal_R009960
Tyto alba
Tal_R009960
I
AAH80434
Xenopus laevis
AAH80434
I
hoxa13.L
Xenopus laevis
XB-GENE-17335312
I
hoxc13
Xenopus tropicalis
XB-GENE-478832
I
hoxa13
Xenopus tropicalis
XB-GENE-479980
I
hoxd13.S
Xenopus laevis
XB-GENE-482324
I
hoxa13.S
Xenopus laevis
XB-GENE-865329
I