CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA08G47520
(
Glycine max
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GLYMA08G47520
T293075_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC083
M02374_2.00
Arabidopsis thaliana
WYACGYAANN
NNTTRCGTRW
PBM
Weirauch et al.(2014)
pTH7308
0.919
0.821
NAC083
M07230_2.00
Arabidopsis thaliana
TRCKTRWNNNDYAMG
CKTRHNNNWYAMGYA
Dap-seq
OMalley et al.(2016)
ANAC083_colamp_a
0.919
0.821
NAC083
M07231_2.00
Arabidopsis thaliana
TTNCKTRWNNHDYACGYWA
TWRCGTRHDNNWYAMGNAA
Dap-seq
OMalley et al.(2016)
ANAC083_col_v3a
0.919
0.821
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA08G47520.1
NAC/NAM
15
139
PPGFRFHPTDEELVLQYLKRKVFSCPLPASIIPELHVCKSDPWDLPGDLEQERYFFSTKVAKYPNGNRSNRATNSGYWKATGLDKQIVTSKGNNQVVGMKKTLVFYRGKPPNGSRTDWIMHEYRL
GLYMA08G47520.2
NAC/NAM
2
84
PPFLGDLEQERYFFSTKVAKYPNGNRSNRATNSGYWKATGLDKQIVTSKGNNQVVGMKKTLVFYRGKPPNGSRTDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Glycine max
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TC013909
Tribolium castaneum
TC013909
I
fgeneshNG_pg.scaffold_5000147
Naegleria gruberi
fgeneshNG_pg.scaffold_5000147
I
F775_15912
Aegilops tauschii
F775_15912
N
Cucsa.395170
Cucumis sativus
Cucsa.395170
N
Lus10026432.g
Linum usitatissimum
Lus10026432.g
N