CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G011598
(
Zea mays
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GRMZM2G011598
T293184_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC018
M07176_2.00
Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH
Dap-seq
OMalley et al.(2016)
NAM_colamp_a
0.919
0.748
NAC018
M07177_2.00
Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW
Dap-seq
OMalley et al.(2016)
NAM_col_v3a
0.919
0.748
NAC025
M02368_2.00
Arabidopsis thaliana
YACGYAAY
RTTRCGTR
PBM
Weirauch et al.(2014)
pTH7656
0.878
0.739
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G011598_P01
NAC/NAM
10
137
PPGFRFHPTDEELILHYLRNRAANAPCPVAIIADVDIYKFDPWDLPSRAAYGDKEWYFFSPRDRKYPNGIRPNRAAGSGYWKATGTDKPIHSSTTAGESVGVKKALVFYEGRPPKGTKTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Zea mays
TFs
181 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sakowv30043886m.g
Saccoglossus kowalevskii
Sakowv30043886m.g
I
ENSGMOG00000003250
Gadus morhua
ENSGMOG00000003250
I
ENSPMAG00000000497
Petromyzon marinus
ENSPMAG00000000497
I
Ocbimv22013214m.g
Octopus bimaculoides
Ocbimv22013214m.g
I
GB55193
Apis mellifera
GB55193
N
LLOJ008948
Lutzomyia longipalpis
LLOJ008948
N
Hsal_01990--XP_391891.1_APIME
Harpegnathos saltator
Hsal_01990--XP_391891.1_APIME
N
Cflo_03461--XP_391891.1_APIME
Camponotus floridanus
Cflo_03461--XP_391891.1_APIME
N
SINV25019
Solenopsis invicta
SINV25019
N
NV13275
Nasonia vitripennis
NV13275
N
L798_06852
Zootermopsis nevadensis
L798_06852
N
ACEP15271
Atta cephalotes
ACEP15271
N
GK18102
Drosophila willistoni
FBgn0220101
N
GJ21463
Drosophila virilis
FBgn0208589
N
GH13580
Drosophila grimshawi
FBgn0121056
N
CGI_10005894
Crassostrea gigas
CGI_10005894
N
ACYPI004884
Acyrthosiphon pisum
ACYPI004884
N