CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr6G36840_001
(
Musa acuminata
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GSMUA_Achr6G36840_001
T293433_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC037
M07187_2.00
Arabidopsis thaliana
CKTVNDNHNYAMG
CKTRNDNHNBAMG
Dap-seq
OMalley et al.(2016)
VND1_col_a
0.881
0.842
ANAC076
M07224_2.00
Arabidopsis thaliana
TRCKTVHNNHNYAMG
CKTRNDNNDBAMGYA
Dap-seq
OMalley et al.(2016)
VND2_col_a
0.876
0.842
ANAC076
M07225_2.00
Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN
NNNDTDRCKTRNDNNDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND2_colamp_a
0.876
0.842
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr6P36840_001
NAC/NAM
9
136
PPGFRFHPTDEELVGYYLRKKVAARKIDLDVIKDVDLYKIEPWDLEEICKIGAEEQTEWHFFSHKDKKYPTGTRTNRATAAGFWKATGRDKPIYSVRRLIGMRKTLVYYKGRAPNGQKSDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Musa acuminata
TFs
225 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CANTEDRAFT_111458
Candida tenuis
CANTEDRAFT_111458
N
0.000
GNLVRS01_PISO0M07624g
Millerozyma farinosa
GNLVRS01_PISO0M07624g
N
0.000
GNLVRS01_PISO0N07779g
Millerozyma farinosa
GNLVRS01_PISO0N07779g
N
0.000
LELG_00882
Lodderomyces elongisporus
LELG_00882
N
0.000
PGUG_05893
Meyerozyma guilliermondii
PGUG_05893
N
0.000
SPAPADRAFT_53489
Spathaspora passalidarum
SPAPADRAFT_53489
N
0.000