CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr9G01880_001
(
Musa acuminata
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GSMUA_Achr9G01880_001
T293462_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC010
M07167_2.00
Arabidopsis thaliana
NWWNCTTSWNNNWYAMGHHWYH
DRWDDCKTRWNNNWSAAGNWWN
Dap-seq
OMalley et al.(2016)
SND3_colamp_a
0.890
0.579
NAC010
M07168_2.00
Arabidopsis thaliana
CKTSWNNNWYAMGYW
WRCKTRWNNNWSAMG
Dap-seq
OMalley et al.(2016)
SND3_col_b
0.890
0.579
NAC073
M07221_2.00
Arabidopsis thaliana
CTTSWNNNWYAMGYH
DRCKTRWNNNWSAAG
Dap-seq
OMalley et al.(2016)
SND2_col_a
0.875
0.614
NAC073
M07222_2.00
Arabidopsis thaliana
CKTSWNNNWYACGYW
WRCGTRWNNNWSAMG
Dap-seq
OMalley et al.(2016)
SND2_colamp_a
0.875
0.614
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr9P01880_001
NAC/NAM
63
199
PAGVRFDPSDVELLEHLAGKIGLENSKLHMLIDEFIPTLDEDEGICYTHPENLPGAKKDGSSIHFFHRISNAYGTGQRKRRKINQHAFSEECVRWHKTGKTKRVLENGWKKIMVLYRSSKRGSRPDKANWVMHQYHL
Links
Other
NAC/NAM
family TFs
Other
Musa acuminata
TFs
167 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bcin05g00980
Botrytis cinerea
Bcin05g00980
N
0.000
CPUR_05002
Claviceps purpurea
CPUR_05002
N
0.000
CTHT_0071480
Chaetomium thermophilum
CTHT_0071480
N
0.000
GGTG_08239
Gaeumannomyces graminis
GGTG_08239
N
0.000
MAC_02538
Metarhizium acridum
MAC_02538
N
0.000
MAM_01486
Metarhizium album
MAM_01486
N
0.000
MAPG_08031
Magnaporthe poae
MAPG_08031
N
0.000
OIDMADRAFT_143331
Oidiodendron maius
OIDMADRAFT_143331
N
0.000
TRIATDRAFT_283367
Trichoderma atroviride
TRIATDRAFT_283367
N
0.000
UV8b_1287
Ustilaginoidea virens
UV8b_1287
N
0.000