CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GSMUA_AchrUn_randomG17260_001
(
Musa acuminata
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GSMUA_AchrUn_randomG17260_001
T293484_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_AchrUn_randomP17260_001
NAC/NAM
11
151
PPGFRFYPSDEELVCHYLYKKVLSNGGSAEGTMVEDSRCGDALPVVIVGCRRREDVSFPLDAAKLSANEWYFFSFRDRKYASGSRANRATKSGYWKATGKDRTIYDPTTHTMVGMRKTLVFYQGRAPNGAKTGWVMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Musa acuminata
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_165.12
Carica papaya
evm.TU.supercontig_165.12
N
0.936
PRUPE_ppa008801mg
Prunus persica
PRUPE_ppa008801mg
N
0.947
TCM_032479
Theobroma cacao
TCM_032479
N
0.967
Ca_13537
Cicer arietinum
Ca_13537
N
0.929
Pm011234
Prunus mume
Pm011234
N
0.919
Eucgr.A00368
Eucalyptus grandis
Eucgr.A00368
N
0.876
Eucgr.A00370
Eucalyptus grandis
Eucgr.A00370
N
0.878
Eucgr.A00437
Eucalyptus grandis
Eucgr.A00437
N
0.873
Eucgr.F01449
Eucalyptus grandis
Eucgr.F01449
N
0.935
POPTR_0002s15530
Populus trichocarpa
POPTR_0002s15530
N
0.913
gene10469-v1.0-hybrid
Fragaria vesca
gene10469-v1.0-hybrid
N
0.951
MDP0000216357
Malus domestica
MDP0000216357
N
0.903
MDP0000298182
Malus domestica
MDP0000298182
N
0.951
SapurV1A.0024s0360
Salix purpurea
SapurV1A.0024s0360
N
0.924
SapurV1A.0284s0040
Salix purpurea
SapurV1A.0284s0040
N
0.947
SapurV1A.0321s0370
Salix purpurea
SapurV1A.0321s0370
N
0.892
PK23481.1
Cannabis sativa
PK23481.1
N
0.938
chr3.CM0279.430.nd
Lotus japonicus
chr3.CM0279.430.nd
N
0.940
OBART02G24560
Oryza barthii
OBART02G24560
N
0.900
BGIOSGA007201
Oryza indica
BGIOSGA007201
N
0.873
GLYMA15G40510
Glycine max
GLYMA15G40510
N
0.926
GSMUA_Achr11G22760_001
Musa acuminata
GSMUA_Achr11G22760_001
N
0.986
GSMUA_Achr6G30050_001
Musa acuminata
GSMUA_Achr6G30050_001
N
0.913
GSMUA_Achr6G36550_001
Musa acuminata
GSMUA_Achr6G36550_001
N
0.973
LPERR02G20100
Leersia perrieri
LPERR02G20100
N
0.870
MTR_2g064470
Medicago truncatula
MTR_2g064470
N
0.940
OB02G31950
Oryza brachyantha
OB02G31950
N
0.895
AMTR_s00067p00064350
Amborella trichopoda
AMTR_s00067p00064350
N
0.937
OGLUM02G24950
Oryza glumaepatula
OGLUM02G24950
N
0.901
OLONG_000596
Oryza longistaminata
OLONG_000596
N
0.893
OMERI02G24100
Oryza meridionalis
OMERI02G24100
N
0.901
OMERI03G00460
Oryza meridionalis
OMERI03G00460
N
0.950
ONIVA02G26880
Oryza nivara
ONIVA02G26880
N
0.901
OPUNC03G00610
Oryza punctata
OPUNC03G00610
N
0.871
ORUFI02G25930
Oryza rufipogon
ORUFI02G25930
N
0.900