CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LPERR01G34330
(
Leersia perrieri
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
LPERR01G34330
T293503_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC035
M07186_2.00
Arabidopsis thaliana
CBTNNNNNDYACGKMAHHN
NDDTKMCGTRHNNNNNAVG
Dap-seq
OMalley et al.(2016)
ANAC034_col
0.949
0.930
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR01G34330.1
NAC/NAM
47
172
MPGFRFHPTEEELIEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRAENNRPIGLKKTLVFYSGKAPKGVRSSWIMNEYRL
LPERR01G34330.2
NAC/NAM
47
172
MPGFRFHPTEEELIEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRAENNRPIGLKKTLVFYSGKAPKGVRSSWIMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Leersia perrieri
TFs
120 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PaG_06601
Pseudozyma aphidis
PaG_06601
N
estExt_Genewise1Plus.C_10795
Heterobasidion annosum
estExt_Genewise1Plus.C_10795
N
estExt_fgeneshTM_pg.C_50362
Tremella mesenterica
estExt_fgeneshTM_pg.C_50362
N
UM02061
Ustilago maydis
UM02061
N
SERLA73DRAFT_49851
Serpula lacrymans
SERLA73DRAFT_49851
N
PHSY_000700
Pseudozyma hubeiensis
PHSY_000700
N
PHLGIDRAFT_83469
Phlebiopsis gigantea
PHLGIDRAFT_83469
N
PHACADRAFT_247554
Phanerochaete carnosa
PHACADRAFT_247554
N
PAN0_008d3627
Pseudozyma antarctica
PAN0_008d3627
N
A1Q1_05146
Trichosporon asahii
A1Q1_05146
N
M407DRAFT_219867
Tulasnella calospora
M407DRAFT_219867
N
K437DRAFT_132732
Tilletiaria anomala
K437DRAFT_132732
N
JAAARDRAFT_203058
Jaapia argillacea
JAAARDRAFT_203058
N
HETIRDRAFT_468737
Heterobasidion irregulare
HETIRDRAFT_468737
N
GLOTRDRAFT_68601
Gloeophyllum trabeum
GLOTRDRAFT_68601
N
FOMPIDRAFT_1035071
Fomitopsis pinicola
FOMPIDRAFT_1035071
N
CERSUDRAFT_110761
Ceriporiopsis subvermispora
CERSUDRAFT_110761
N