CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MTR_1g090720
(
Medicago truncatula
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
MTR_1g090720
T293736_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC050
M07200_2.00
Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG
Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a
0.915
0.833
ANAC050
M07201_2.00
Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG
Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a
0.915
0.833
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH43316
NAC/NAM
43
169
APGFRFHPTDEELVIYYLKRKVSGKPFRFDAIAEVDIYKSEPWDLFDKSRLKTRDQEWYFFSALDKKYGNGGRMNRATLQGYWKATGNDRPVKHDLRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Medicago truncatula
TFs
93 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FEZF2
Gorilla gorilla
ENSGGOG00000026200
I
0.000
FEZF1
Tupaia belangeri
ENSTBEG00000005307
N
0.000
SPER_0000393601
Spirometra erinaceieuropaei
SPER_0000393601
N
0.000
HDID_0001087701
Hymenolepis diminuta
HDID_0001087701
N
0.000
csin109610
Clonorchis sinensis
csin109610
N
0.000
Ogr03134
Ophisaurus gracilis
Ogr03134
N
0.000
Myotis_brandtii_AASS_10009316
Myotis brandtii
Myotis_brandtii_AASS_10009316
N
0.000
Cmyd_10003456
Chelonia mydas
Cmyd_10003456
N
0.000
Alligator_sinensis_CCG021039.1
Alligator sinensis
Alligator_sinensis_CCG021039.1
N
0.000
NEMVEDRAFT_v1g230810
Nematostella vectensis
NEMVEDRAFT_v1g230810
N
0.000
KGM_06814
Danaus plexippus
KGM_06814
N
0.000
FEZF1
Vicugna pacos
ENSVPAG00000002991
N
0.000
Fezf2
Dipodomys ordii
ENSDORG00000000030
N
0.000
FEZF1
Pan troglodytes
ENSPTRG00000019631
N
0.000
ENSPPYG00000017951
Pongo abelii
ENSPPYG00000017951
N
0.000
FEZF1
Procavia capensis
ENSPCAG00000011405
N
0.000
FEZF1
Ochotona princeps
ENSOPRG00000015502
N
0.000
ENSMICG00000001950
Microcebus murinus
ENSMICG00000001950
N
0.000
FEZF1
Echinops telfairi
ENSETEG00000020278
N
0.000
FEZF1
Erinaceus europaeus
ENSEEUG00000002685
N
0.000
ENSDORG00000002484
Dipodomys ordii
ENSDORG00000002484
N
0.000