CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0005s24750
(
Populus trichocarpa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
POPTR_0005s24750
T295257_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0005s24750.1
NAC/NAM
1
27
MRKTLVFYRNRAPNGIKTGWIMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Populus trichocarpa
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava15563.m1
Manihot esculenta
cassava15563.m1
N
0.025
SapurV1A.0233s0110
Salix purpurea
SapurV1A.0233s0110
N
0.025
MDP0000723277
Malus domestica
MDP0000723277
N
0.025
MDP0000697030
Malus domestica
MDP0000697030
N
0.025
Lus10024908.g
Linum usitatissimum
Lus10024908.g
N
0.025
Lus10022915.g
Linum usitatissimum
Lus10022915.g
N
0.025
Gorai.001G254300
Gossypium raimondii
Gorai.001G254300
N
0.025
gene08112-v1.0-hybrid
Fragaria vesca
gene08112-v1.0-hybrid
N
0.025
evm.TU.supercontig_165.12
Carica papaya
evm.TU.supercontig_165.12
N
0.025
Ciclev10021312m.g
Citrus clementina
Ciclev10021312m.g
N
0.025
GLYMA03G32116
Glycine max
GLYMA03G32116
N
0.025
Pm020580
Prunus mume
Pm020580
N
0.025
Ca_07743
Cicer arietinum
Ca_07743
N
0.025
TCM_003998
Theobroma cacao
TCM_003998
N
0.025
PRUPE_ppa009628mg
Prunus persica
PRUPE_ppa009628mg
N
0.025
MTR_1g069805
Medicago truncatula
MTR_1g069805
N
0.025
GLYMA19G34881
Glycine max
GLYMA19G34881
N
0.025
GLYMA13G18620
Glycine max
GLYMA13G18620
N
0.025
GLYMA10G04350
Glycine max
GLYMA10G04350
N
0.025