POPTR_0008s08850 (Populus trichocarpa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 POPTR_0008s08850 T295281_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC029
M00973_2.00 		Arabidopsis thaliana
NBACGBMWNN
NNWKVCGTVN		 PBM
Lindemose et al.(2014)
NAP 		0.940 0.884
NAC029
M02369_2.00 		Arabidopsis thaliana
NRGTCAWNN
NNWTGACYN		 PBM
Weirauch et al.(2014)
pTH8397 		0.940 0.884
NAC029
M07180_2.00 		Arabidopsis thaliana
NCGTVHNNNWYACGBMA
TKVCGTRWNNNDBACGN		 Dap-seq
OMalley et al.(2016)
NAP_colamp_a 		0.940 0.884
NAC029
M07181_2.00 		Arabidopsis thaliana
WYACGBMAYYD
HRRTKVCGTRW		 Dap-seq
OMalley et al.(2016)
NAP_col_v3a 		0.940 0.884
Traes_5BL_CC18CAD72
M11085_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC691_01 		0.878 0.759
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0008s08850.1 NAC/NAM 11 135

Links

Other NAC/NAM family TFs
Other Populus trichocarpa TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SNOG_10764 Stagonospora nodorum SNOG_10764 N 0.000
COCC4DRAFT_128058 Bipolaris maydis COCC4DRAFT_128058 N 0.000
COCCADRAFT_99591 Bipolaris zeicola COCCADRAFT_99591 N 0.000
COCMIDRAFT_2302 Bipolaris oryzae COCMIDRAFT_2302 N 0.000
COCSADRAFT_243580 Bipolaris sorokiniana COCSADRAFT_243580 N 0.000
COCVIDRAFT_17516 Bipolaris victoriae COCVIDRAFT_17516 N 0.000
PTRG_09921 Pyrenophora triticirepentis PTRG_09921 N 0.000
PTT_01703 Pyrenophora teres PTT_01703 N 0.000
SETTUDRAFT_103147 Setosphaeria turcica SETTUDRAFT_103147 N 0.000
Z518_03482 Rhinocladiella mackenziei Z518_03482 N 0.000
estExt_Genewise1.C_11541 Cochliobolus heterostrophus C5 estExt_Genewise1.C_11541 N 0.000
AB00295.1 Alternaria brassicicola AB00295.1 N 0.000