CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc03g080090.2
(
Solanum lycopersicum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Solyc03g080090.2
T295835_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.912
0.544
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc03g080090.2.1
NAC/NAM
28
155
PVGYRFRPTDEELVNHYLRLKINGADSQVSVIREVDICKLEPWDLPDLSVVESHDNEWFFFCPKDRKYQNGQRLNRATERGYWKATGKDRNIVTKKGSKIGMKKTLVYYIGRAPEGKRTHWVIHEYRA
Links
Other
NAC/NAM
family TFs
Other
Solanum lycopersicum
TFs
156 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCSAG00000018837
Chlorocebus sabaeus
ENSCSAG00000018837
N
ZNF625
Homo sapiens
ENSG00000257591
N
ZNF625
Gorilla gorilla
ENSGGOG00000011669
N
ENSNLEG00000019141
Nomascus leucogenys
ENSNLEG00000019141
N
ENSPANG00000008551
Papio anubis
ENSPANG00000008551
N
ENSPPYG00000029843
Pongo abelii
ENSPPYG00000029843
N
ZNF625
Pan troglodytes
ENSPTRG00000010523
N