CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_027945
(
Theobroma cacao
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
TCM_027945
T295969_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC035
M07186_2.00
Arabidopsis thaliana
CBTNNNNNDYACGKMAHHN
NDDTKMCGTRHNNNNNAVG
Dap-seq
OMalley et al.(2016)
ANAC034_col
0.946
0.930
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY26392
NAC/NAM
39
164
MPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRAENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Theobroma cacao
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_145470
Schistosoma mansoni
Smp_145470
N
0.000
Sjc_0102400
Schistosoma japonicum
Sjc_0102400
N
0.000
A_03247
Schistosoma haematobium
A_03247
N
0.000
csin106650
Clonorchis sinensis
csin106650
N
0.000
D915_05028
Fasciola hepatica
D915_05028
N
0.000
SCUD_0000153201
Schistosoma curassoni
SCUD_0000153201
N
0.000
T265_14414
Opisthorchis viverrini
T265_14414
N
0.000
TRE_0000400601
Trichobilharzia regenti
TRE_0000400601
N
0.000