CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla004630
(
Citrullus lanatus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Cla004630
T296538_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC035
M07186_2.00
Arabidopsis thaliana
CBTNNNNNDYACGKMAHHN
NDDTKMCGTRHNNNNNAVG
Dap-seq
OMalley et al.(2016)
ANAC034_col
0.945
0.930
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla004630
NAC/NAM
44
169
MPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTDDFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Citrullus lanatus
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGI_10007146
Crassostrea gigas
CGI_10007146
N
0.000
HelroG76642
Helobdella robusta
HelroG76642
N
0.000
LotgiG135618
Lottia gigantea
LotgiG135618
N
0.000
e_gw.84.219.1
Branchiostoma floridae
e_gw.84.219.1
N
0.000
estExt_gwp.C_830005
Branchiostoma floridae
estExt_gwp.C_830005
N
0.000
Ocbimv22034128m.g
Octopus bimaculoides
Ocbimv22034128m.g
N
0.000
Sakowv30022749m.g
Saccoglossus kowalevskii
Sakowv30022749m.g
N
0.000