CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla019771
(
Citrullus lanatus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Cla019771
T296590_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC025
M02368_2.00
Arabidopsis thaliana
YACGYAAY
RTTRCGTR
PBM
Weirauch et al.(2014)
pTH7656
0.899
0.821
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla019771
NAC/NAM
23
153
PPGFRFHPTDEELVVHYLTRKLSSSPLPAPIIAELDLYKFDPWDLPSKAVFGKNEWYFFTPRERKYPNGARPNRAAISGYWKATGTDKPIMSCNGNGNGTQKVGVKKALVFYGGRPPKGVKTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Citrullus lanatus
TFs
353 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
H101_01565
Trichophyton interdigitale
H101_01565
N
H105_06620
Trichophyton soudanense
H105_06620
N
TEQG_00179
Trichophyton equinum
TEQG_00179
N