Cucsa.308770 (Cucumis sativus)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cucsa.308770 T297009_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC078
M02372_2.00 		Arabidopsis thaliana
NNRCAMGHMANN
NNTKDCKTGYNN		 PBM
Weirauch et al.(2014)
pTH7209 		0.918 0.868
NAC078
M07226_2.00 		Arabidopsis thaliana
TTDCTTGNDNNDCAAG
CTTGHNNHNCAAGHAA		 Dap-seq
OMalley et al.(2016)
NAC2_colamp_a 		0.918 0.868
NAC078
M07227_2.00 		Arabidopsis thaliana
DTTWCTTGNNNNRCAAG
CTTGYNNNNCAAGWAAH		 Dap-seq
OMalley et al.(2016)
NAC2_col_v3a 		0.918 0.868
NAC078
M11083_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC078_Q2 		0.918 0.868
NAC053
M07202_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAG
CTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_colamp_a 		0.904 0.833
NAC053
M07203_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAGH
DCTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_col 		0.904 0.833
NAC053
M11079_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G10500_Q2 		0.904 0.833
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.308770.1 NAC/NAM 10 136
Cucsa.308770.2 NAC/NAM 1 27

Links

Other NAC/NAM family TFs
Other Cucumis sativus TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.000
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.000
evm.TU.supercontig_129.74 Carica papaya evm.TU.supercontig_129.74 I 0.000
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.000
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.000
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I 0.000
Carubv10002068m.g Capsella rubella Carubv10002068m.g I 0.000
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I 0.000
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.000
mgf018581m Mimulus guttatus mgf018581m I 0.000
mgf017392m Mimulus guttatus mgf017392m I 0.000
mgf003466m Mimulus guttatus mgf003466m I 0.000
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.000
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.000
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.000
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.000
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.000
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.000
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.000
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.000
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.000
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.000
30138.m003866 Ricinus communis 30138.m003866 I 0.000
MDP0000205823 Malus domestica MDP0000205823 I 0.000
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.000
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I 0.000
PK07533.1 Cannabis sativa PK07533.1 I 0.000
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I 0.000
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I 0.000
SapurV1A.0396s0080 Salix purpurea SapurV1A.0396s0080 I 0.000
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.000
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.000
MDP0000863909 Malus domestica MDP0000863909 I 0.000
MDP0000239026 Malus domestica MDP0000239026 I 0.000
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I 0.000
Lus10040428.g Linum usitatissimum Lus10040428.g I 0.000
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.000
Lus10025024.g Linum usitatissimum Lus10025024.g I 0.000
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.000
Lus10010005.g Linum usitatissimum Lus10010005.g I 0.000
Gorai.008G065300 Gossypium raimondii Gorai.008G065300 I 0.000
Gorai.007G122800 Gossypium raimondii Gorai.007G122800 I 0.000
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.000
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.000
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.000
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.000
30131.m007078 Ricinus communis 30131.m007078 I 0.000
PGSC0003DMG400021431 Solanum tuberosum PGSC0003DMG400021431 I 0.000
PGSC0003DMG400003701 Solanum tuberosum PGSC0003DMG400003701 I 0.000
PGSC0003DMG400003529 Solanum tuberosum PGSC0003DMG400003529 I 0.000
MTR_7g029400 Medicago truncatula MTR_7g029400 I 0.000
GSMUA_Achr8G29960_001 Musa acuminata GSMUA_Achr8G29960_001 I 0.000
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.000
GSMUA_Achr2G06540_001 Musa acuminata GSMUA_Achr2G06540_001 I 0.000
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.000
GSMUA_Achr11G20700_001 Musa acuminata GSMUA_Achr11G20700_001 I 0.000
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.000
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I 0.000
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.000
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.000
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.000
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.000
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.000
Bra039631 Brassica rapa Bra039631 I 0.000
Bra023540 Brassica rapa Bra023540 I 0.000
Bra008670 Brassica rapa Bra008670 I 0.000
Bra006324 Brassica rapa Bra006324 I 0.000
Bo9g163740 Brassica oleracea Bo9g163740 I 0.000
Bo3g010750 Brassica oleracea Bo3g010750 I 0.000
Bo3g010620 Brassica oleracea Bo3g010620 I 0.000
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I 0.000
Pm015434 Prunus mume Pm015434 I 0.000
Pm002353 Prunus mume Pm002353 I 0.000
Cla020641 Citrullus lanatus Cla020641 I 0.000
Cla016841 Citrullus lanatus Cla016841 I 0.000
Cla016748 Citrullus lanatus Cla016748 I 0.000
Ca_09362 Cicer arietinum Ca_09362 I 0.000
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.000
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.000
TCM_000835 Theobroma cacao TCM_000835 I 0.000
Solyc02g092090.1 Solanum lycopersicum Solyc02g092090.1 I 0.000
Solyc02g084860.1 Solanum lycopersicum Solyc02g084860.1 I 0.000
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.000
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.000
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.000
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.000
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.000
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I 0.000
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I 0.000
Lus10024279.g Linum usitatissimum Lus10024279.g N 0.000
mgf022473m Mimulus guttatus mgf022473m N 0.000
Aquca_024_00067 Aquilegia coerulea Aquca_024_00067 N 0.000
orange1.1g041765m.g Citrus sinensis orange1.1g041765m.g N 0.000
Ciclev10002731m.g Citrus clementina Ciclev10002731m.g N 0.000
AMTR_s00014p00097990 Amborella trichopoda AMTR_s00014p00097990 N 0.000
Eucgr.F01867 Eucalyptus grandis Eucgr.F01867 N 0.000
Eucgr.G01645 Eucalyptus grandis Eucgr.G01645 N 0.000