Bostr.13671s0233 (Boechera stricta)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Bostr.13671s0233 T297252_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC007
M07164_2.00 		Arabidopsis thaliana
TTRCKTVHDNNNYAMG
CKTRNNNHDBAMGYAA		 Dap-seq
OMalley et al.(2016)
VND4_colamp_a 		0.976 1.000
NAC007
M07165_2.00 		Arabidopsis thaliana
TGCKTVHDNHDYAMG
CKTRHDNHDBAMGCA		 Dap-seq
OMalley et al.(2016)
VND4_col 		0.976 1.000
NAC037
M07187_2.00 		Arabidopsis thaliana
CKTVNDNHNYAMG
CKTRNDNHNBAMG		 Dap-seq
OMalley et al.(2016)
VND1_col_a 		0.932 0.842
ANAC076
M07224_2.00 		Arabidopsis thaliana
TRCKTVHNNHNYAMG
CKTRNDNNDBAMGYA		 Dap-seq
OMalley et al.(2016)
VND2_col_a 		0.928 0.842
ANAC076
M07225_2.00 		Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN
NNNDTDRCKTRNDNNDBAMGCAA		 Dap-seq
OMalley et al.(2016)
VND2_colamp_a 		0.928 0.842
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.13671s0233.1.p NAC/NAM 8 135

Links

Other NAC/NAM family TFs
Other Boechera stricta TFs

295 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CJA06788 Caenorhabditis japonica CJA06788 I 0.000
ASIM_0001701001 Anisakis simplex ASIM_0001701001 I 0.000
WUBG_12339 Wuchereria bancrofti WUBG_12339 N 0.000
Bm4873 Brugia malayi Bm4873 N 0.000
WBGene00242657 Onchocerca volvulus WBGene00242657 N 0.000
BTMF_0001588101 Brugia timori BTMF_0001588101 N 0.000
EEL_0000498601 Elaeophora elaphi EEL_0000498601 N 0.000
nAv.1.0.1.g02318 Acanthocheilonema viteae nAv.1.0.1.g02318 N 0.000
nDi.2.2.2.g06454 Dirofilaria immitis nDi.2.2.2.g06454 N 0.000
OFLC_0000054701 Onchocerca flexuosa OFLC_0000054701 N 0.000