Bostr.5325s0006 (Boechera stricta)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Bostr.5325s0006 T297318_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC005
M07163_2.00 		Arabidopsis thaliana
WWNCTTVYNHHNYAAGTWW
WWACTTRNDDNRBAAGNWW		 Dap-seq
OMalley et al.(2016)
ANAC005_col_a 		0.972 0.759
NAC004
M07161_2.00 		Arabidopsis thaliana
CTTVYNYNRYAAGY
RCTTRYNRNRBAAG		 Dap-seq
OMalley et al.(2016)
ANAC004_col_a 		0.965 0.768
NAC004
M07162_2.00 		Arabidopsis thaliana
WVCTTVYNBNRYAAGYWWBNN
NNVWWRCTTRYNVNRBAAGBW		 Dap-seq
OMalley et al.(2016)
ANAC004_colamp_a 		0.965 0.768
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.5325s0006.1.p NAC/NAM 4 132
Bostr.5325s0006.2.p NAC/NAM 4 132

Links

Other NAC/NAM family TFs
Other Boechera stricta TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
COCC4DRAFT_173998 Bipolaris maydis COCC4DRAFT_173998 N
COCCADRAFT_101408 Bipolaris zeicola COCCADRAFT_101408 N
COCMIDRAFT_22427 Bipolaris oryzae COCMIDRAFT_22427 N
COCSADRAFT_248822 Bipolaris sorokiniana COCSADRAFT_248822 N
COCVIDRAFT_113106 Bipolaris victoriae COCVIDRAFT_113106 N
LEMA_P045490.1 Leptosphaeria maculans LEMA_P045490.1 N
PTRG_04320 Pyrenophora triticirepentis PTRG_04320 N
PTT_06499 Pyrenophora teres PTT_06499 N
SETTUDRAFT_24691 Setosphaeria turcica SETTUDRAFT_24691 N
estExt_Genewise1.C_130322 Cochliobolus heterostrophus C5 estExt_Genewise1.C_130322 N