Cagra.1822s0012 (Capsella grandiflora)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cagra.1822s0012 T297400_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC010
M07167_2.00 		Arabidopsis thaliana
NWWNCTTSWNNNWYAMGHHWYH
DRWDDCKTRWNNNWSAAGNWWN		 Dap-seq
OMalley et al.(2016)
SND3_colamp_a 		0.994 0.991
NAC010
M07168_2.00 		Arabidopsis thaliana
CKTSWNNNWYAMGYW
WRCKTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND3_col_b 		0.994 0.991
NAC073
M07221_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYH
DRCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
SND2_col_a 		0.973 0.746
NAC073
M07222_2.00 		Arabidopsis thaliana
CKTSWNNNWYACGYW
WRCGTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND2_colamp_a 		0.973 0.746
anac075
M07223_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
ANAC075_col_a 		0.972 0.746
PK27085.1
M01293_2.00 		Cannabis sativa
AATTTATT
AATAAATT		 PBM
Lambert et al.(2019)
pTH11262 		0.972 0.746
PK11990.1
M01290_2.00 		Cannabis sativa
DNAHDNHDNN
NNHDNHDTNH		 PBM
Lambert et al.(2019)
pTH11336 		0.948 0.816
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1822s0012.1.p NAC/NAM 78 217

Links

Other NAC/NAM family TFs
Other Capsella grandiflora TFs

334 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TVAG_442490 Trichomonas vaginalis TVAG_442490 N 0.000
TVAG_534630 Trichomonas vaginalis TVAG_534630 N 0.000
TVAG_531390 Trichomonas vaginalis TVAG_531390 N 0.000
TVAG_517530 Trichomonas vaginalis TVAG_517530 N 0.000
TVAG_509260 Trichomonas vaginalis TVAG_509260 N 0.000
TVAG_507340 Trichomonas vaginalis TVAG_507340 N 0.000
TVAG_506740 Trichomonas vaginalis TVAG_506740 N 0.000
TVAG_486380 Trichomonas vaginalis TVAG_486380 N 0.000
TVAG_473020 Trichomonas vaginalis TVAG_473020 N 0.000
TVAG_471970 Trichomonas vaginalis TVAG_471970 N 0.000
TVAG_457930 Trichomonas vaginalis TVAG_457930 N 0.000
TVAG_539860 Trichomonas vaginalis TVAG_539860 N 0.000
TVAG_440640 Trichomonas vaginalis TVAG_440640 N 0.000
TVAG_439560 Trichomonas vaginalis TVAG_439560 N 0.000
TVAG_427180 Trichomonas vaginalis TVAG_427180 N 0.000
TVAG_422330 Trichomonas vaginalis TVAG_422330 N 0.000
TVAG_415680 Trichomonas vaginalis TVAG_415680 N 0.000
TVAG_415210 Trichomonas vaginalis TVAG_415210 N 0.000
TVAG_376980 Trichomonas vaginalis TVAG_376980 N 0.000
TVAG_365130 Trichomonas vaginalis TVAG_365130 N 0.000
TVAG_359360 Trichomonas vaginalis TVAG_359360 N 0.000
TVAG_357040 Trichomonas vaginalis TVAG_357040 N 0.000
TVAG_562780 Trichomonas vaginalis TVAG_562780 N 0.000
TVAG_603880 Trichomonas vaginalis TVAG_603880 N 0.000
TVAG_603130 Trichomonas vaginalis TVAG_603130 N 0.000
TVAG_584920 Trichomonas vaginalis TVAG_584920 N 0.000
TVAG_584820 Trichomonas vaginalis TVAG_584820 N 0.000
TVAG_582290 Trichomonas vaginalis TVAG_582290 N 0.000
TVAG_579950 Trichomonas vaginalis TVAG_579950 N 0.000
TVAG_572200 Trichomonas vaginalis TVAG_572200 N 0.000
TVAG_568350 Trichomonas vaginalis TVAG_568350 N 0.000
TVAG_566860 Trichomonas vaginalis TVAG_566860 N 0.000
TVAG_566130 Trichomonas vaginalis TVAG_566130 N 0.000
TVAG_353570 Trichomonas vaginalis TVAG_353570 N 0.000
TVAG_562210 Trichomonas vaginalis TVAG_562210 N 0.000
TVAG_553880 Trichomonas vaginalis TVAG_553880 N 0.000
TVAG_551700 Trichomonas vaginalis TVAG_551700 N 0.000
TVAG_550550 Trichomonas vaginalis TVAG_550550 N 0.000
TVAG_550050 Trichomonas vaginalis TVAG_550050 N 0.000
TVAG_546680 Trichomonas vaginalis TVAG_546680 N 0.000
TVAG_546620 Trichomonas vaginalis TVAG_546620 N 0.000
TVAG_546580 Trichomonas vaginalis TVAG_546580 N 0.000
TVAG_543030 Trichomonas vaginalis TVAG_543030 N 0.000
TVAG_066150 Trichomonas vaginalis TVAG_066150 N 0.000
TVAG_184700 Trichomonas vaginalis TVAG_184700 N 0.000
TVAG_176590 Trichomonas vaginalis TVAG_176590 N 0.000
TVAG_143010 Trichomonas vaginalis TVAG_143010 N 0.000
TVAG_125900 Trichomonas vaginalis TVAG_125900 N 0.000
TVAG_115140 Trichomonas vaginalis TVAG_115140 N 0.000
TVAG_104610 Trichomonas vaginalis TVAG_104610 N 0.000
TVAG_085170 Trichomonas vaginalis TVAG_085170 N 0.000
TVAG_084000 Trichomonas vaginalis TVAG_084000 N 0.000
TVAG_082490 Trichomonas vaginalis TVAG_082490 N 0.000
TVAG_072810 Trichomonas vaginalis TVAG_072810 N 0.000
TVAG_193570 Trichomonas vaginalis TVAG_193570 N 0.000
TVAG_055380 Trichomonas vaginalis TVAG_055380 N 0.000
TVAG_051900 Trichomonas vaginalis TVAG_051900 N 0.000
TVAG_039590 Trichomonas vaginalis TVAG_039590 N 0.000
TVAG_034300 Trichomonas vaginalis TVAG_034300 N 0.000
TVAG_032260 Trichomonas vaginalis TVAG_032260 N 0.000
TVAG_031630 Trichomonas vaginalis TVAG_031630 N 0.000
TVAG_022050 Trichomonas vaginalis TVAG_022050 N 0.000
TVAG_019620 Trichomonas vaginalis TVAG_019620 N 0.000
TVAG_003790 Trichomonas vaginalis TVAG_003790 N 0.000
TVAG_270150 Trichomonas vaginalis TVAG_270150 N 0.000
TVAG_347580 Trichomonas vaginalis TVAG_347580 N 0.000
TVAG_345950 Trichomonas vaginalis TVAG_345950 N 0.000
TVAG_341960 Trichomonas vaginalis TVAG_341960 N 0.000
TVAG_314210 Trichomonas vaginalis TVAG_314210 N 0.000
TVAG_298740 Trichomonas vaginalis TVAG_298740 N 0.000
TVAG_296430 Trichomonas vaginalis TVAG_296430 N 0.000
TVAG_287170 Trichomonas vaginalis TVAG_287170 N 0.000
TVAG_282400 Trichomonas vaginalis TVAG_282400 N 0.000
TVAG_274450 Trichomonas vaginalis TVAG_274450 N 0.000
TVAG_271450 Trichomonas vaginalis TVAG_271450 N 0.000
TVAG_001730 Trichomonas vaginalis TVAG_001730 N 0.000
TVAG_267240 Trichomonas vaginalis TVAG_267240 N 0.000
TVAG_253230 Trichomonas vaginalis TVAG_253230 N 0.000
TVAG_245670 Trichomonas vaginalis TVAG_245670 N 0.000
TVAG_244290 Trichomonas vaginalis TVAG_244290 N 0.000
TVAG_222670 Trichomonas vaginalis TVAG_222670 N 0.000
TVAG_218470 Trichomonas vaginalis TVAG_218470 N 0.000
TVAG_208350 Trichomonas vaginalis TVAG_208350 N 0.000
TVAG_207030 Trichomonas vaginalis TVAG_207030 N 0.000
TVAG_194490 Trichomonas vaginalis TVAG_194490 N 0.000