CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10008817m.g
(
Capsella rubella
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Carubv10008817m.g
T297483_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC13
M07170_2.00
Arabidopsis thaliana
TDNCTTGYYNNNCAAG
CTTGNNNRRCAAGNHA
Dap-seq
OMalley et al.(2016)
ANAC013_col_a
0.966
0.974
ANAC13
M07171_2.00
Arabidopsis thaliana
CTTGYBHNNCAAGNHAH
DTDNCTTGNNDVRCAAG
Dap-seq
OMalley et al.(2016)
ANAC013_colamp_a
0.966
0.974
ANAC13
M11077_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANAC013_Q2
0.966
0.974
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10008817m
NAC/NAM
12
136
APGFRFHPTDEELVVYYLKRKIRRKKLRVEAIGETDVYKFDPEELPEKALHKTRDRQWFFFSLRDRKHGSRSSRATDRGYWKATGKDRVIKCDSRPVGEKKTLVFHRGRAPNGERTNWVMHEYTM
Links
Other
NAC/NAM
family TFs
Other
Capsella rubella
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NCU01238
Neurospora crassa
NCU01238
D
0.000
CIMG_06555
Coccidioides immitis
CIMG_06555
I
0.000
CLUG_00471
Candida lusitaniae
CLUG_00471
I
0.000
CPAG_04992
Candida parapsilosis
CPAG_04992
I
0.000
SNOG_11200
Stagonospora nodorum
SNOG_11200
I
0.000
VDBG_07586
Verticillium albo atrum
VDBG_07586
I
0.000
A1O1_02396
Capronia coronata
A1O1_02396
I
0.000
A1O3_00648
Capronia epimyces
A1O3_00648
I
0.000
A1O5_01000
Cladophialophora psammophila
A1O5_01000
I
0.000
A1O7_04628
Cladophialophora yegresii
A1O7_04628
I
0.000
A1O9_09248
Exophiala aquamarina
A1O9_09248
I
0.000
AACERI_AaceriAFL127C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAFL127C
I
0.000
ACRE_026770
Acremonium chrysogenum
ACRE_026770
I
0.000
AGOS_AFL127C
Ashbya gossypii
AGOS_AFL127C
I
0.000
AOL_s00007g450
Arthrobotrys oligospora
AOL_s00007g450
I
0.000
ARB_06850
Arthroderma benhamiae
ARB_06850
I
0.000
AUEXF2481DRAFT_73501
Aureobasidium subglaciale
AUEXF2481DRAFT_73501
I
0.000
BAUCODRAFT_567336
Baudoinia compniacensis
BAUCODRAFT_567336
I
0.000
BBA_06597
Beauveria bassiana
BBA_06597
I
0.000
Bcin02g00190
Botrytis cinerea
Bcin02g00190
I
0.000
BDDG_05039
Blastomyces dermatitidis
BDDG_05039
I
0.000
BGHDH14_bgh06435
Blumeria graminis
BGHDH14_bgh06435
I
0.000
BN7_4555
Wickerhamomyces ciferrii
BN7_4555
I
0.000
ACLA_001740
Aspergillus clavatus
CADACLAG00000030
I
0.000
CADAFLAG00010689
Aspergillus flavus
CADAFLAG00010689
I
0.000
AFUA_5G03430
Aspergillus fumigatus
CADAFUAG00002555
I
0.000
CADANGAG00008115
Aspergillus niger
CADANGAG00008115
I
0.000
ANIA_08211
Aspergillus nidulans
CADANIAG00004258
I
0.000
CADAORAG00009843
Aspergillus oryzae
CADAORAG00009843
I
0.000
ATEG_08071
Aspergillus terreus
CADATEAG00004027
I
0.000
NFIA_038680
Neosartorya fischeri
CADNFIAG00003100
I
0.000
CaO19.10013
Candida albicans
CaO19.10013
I
0.000
CaO19.2476
Candida albicans
CaO19.2476
I
0.000
CC1G_01421
Coprinopsis cinerea
CC1G_01421
I
0.000
CCM_07966
Cordyceps militaris
CCM_07966
I
0.000
CD36_05420
Candida dubliniensis
CD36_05420
I
0.000
CERSUDRAFT_111018
Ceriporiopsis subvermispora
CERSUDRAFT_111018
I
0.000
CFIO01_06489
Colletotrichum fioriniae
CFIO01_06489
I
0.000
CGGC5_4303
Colletotrichum gloeosporioides
CGGC5_4303
I
0.000
CH063_04817
Colletotrichum higginsianum
CH063_04817
I
0.000
CHGG_07655
Chaetomium globosum
CHGG_07655
I
0.000
CLUG_00471
Clavispora lusitaniae
CLUG_00471
I
0.000
CMQ_2334
Grosmannia clavigera
CMQ_2334
I
0.000
Cob_08727
Colletotrichum orbiculare
Cob_08727
I
0.000
COCC4DRAFT_162164
Bipolaris maydis
COCC4DRAFT_162164
I
0.000
COCCADRAFT_5842
Bipolaris zeicola
COCCADRAFT_5842
I
0.000
COCMIDRAFT_5916
Bipolaris oryzae
COCMIDRAFT_5916
I
0.000
COCSADRAFT_82804
Bipolaris sorokiniana
COCSADRAFT_82804
I
0.000
COCVIDRAFT_24723
Bipolaris victoriae
COCVIDRAFT_24723
I
0.000
CORT_0B08690
Candida orthopsilosis
CORT_0B08690
I
0.000
CPC735_030240
Coccidioides posadasii
CPC735_030240
I
0.000
CPUR_02782
Claviceps purpurea
CPUR_02782
I
0.000
CSUB01_10732
Colletotrichum sublineola
CSUB01_10732
I
0.000
CTHT_0027590
Chaetomium thermophilum
CTHT_0027590
I
0.000
CTRG_04819
Candida tropicalis
CTRG_04819
I
0.000
CY34DRAFT_808492
Suillus luteus
CY34DRAFT_808492
I
0.000
DEHA2D02310g
Debaryomyces hansenii
DEHA2D02310g
I
0.000
DOTSEDRAFT_72726
Dothistroma septosporum
DOTSEDRAFT_72726
I
0.000
EPUS_07035
Endocarpon pusillum
EPUS_07035
I
0.000
EURHEDRAFT_374583
Aspergillus ruber
EURHEDRAFT_374583
I
0.000
EV44_g6012
Erysiphe necator
EV44_g6012
I
0.000
F503_04087
Ophiostoma piceae uamh
F503_04087
I
0.000
FFUJ_13017
Fusarium fujikuroi
FFUJ_13017
I
0.000
FGRRES_16557
Fusarium graminearum
FGRRES_16557
I
0.000
FIBRA_08712
Fibroporia radiculosa
FIBRA_08712
I
0.000
FOMPIDRAFT_1125800
Fomitopsis pinicola
FOMPIDRAFT_1125800
I
0.000
FPSE_05803
Fusarium pseudograminearum
FPSE_05803
I
0.000
G210_1683
Candida maltosa
G210_1683
I
0.000
G647_04054
Cladophialophora carrionii
G647_04054
I
0.000
GALMADRAFT_219890
Galerina marginata
GALMADRAFT_219890
I
0.000
GGTG_06066
Gaeumannomyces graminis
GGTG_06066
I
0.000
GLOTRDRAFT_136133
Gloeophyllum trabeum
GLOTRDRAFT_136133
I
0.000
GLRG_10729
Colletotrichum graminicola
GLRG_10729
I
0.000
GMDG_07609
Pseudogymnoascus destructans
GMDG_07609
I
0.000
GNLVRS01_PISO0I02516g
Millerozyma farinosa
GNLVRS01_PISO0I02516g
I
0.000
GNLVRS01_PISO0J04299g
Millerozyma farinosa
GNLVRS01_PISO0J04299g
I
0.000
GSTUM_00011726001
Tuber melanosporum
GSTUM_00011726001
I
0.000
H072_8579
Dactylellina haptotyla
H072_8579
I
0.000
H101_00678
Trichophyton interdigitale
H101_00678
I
0.000
HCBG_06506
Histoplasma capsulatum
HCBG_06506
I
0.000
HMPREF1120_02353
Exophiala dermatitidis
HMPREF1120_02353
I
0.000
HMPREF1541_08981
Cyphellophora europaea
HMPREF1541_08981
I
0.000
HMPREF1624_03854
Sporothrix schenckii
HMPREF1624_03854
I
0.000
JAAARDRAFT_201792
Jaapia argillacea
JAAARDRAFT_201792
I
0.000
K443DRAFT_676997
Laccaria amethystina
K443DRAFT_676997
I
0.000
KAFR_0A07050
Kazachstania africana
KAFR_0A07050
I
0.000
KLLA0_C16203g
Kluyveromyces lactis
KLLA0_C16203g
I
0.000
KLTH0H03410g
Lachancea thermotolerans
KLTH0H03410g
I
0.000
KNAG_0F01780
Kazachstania naganishii
KNAG_0F01780
I
0.000
KUCA_T00003760001
Kuraishia capsulata
KUCA_T00003760001
I
0.000
LACBIDRAFT_311495
Laccaria bicolor
LACBIDRAFT_311495
I
0.000
LALA0_S05e06744g
Lachancea lanzarotensis
LALA0_S05e06744g
I
0.000
LEMA_P003470.1
Leptosphaeria maculans
LEMA_P003470.1
I
0.000
M404DRAFT_993392
Pisolithus tinctorius
M404DRAFT_993392
I
0.000
M413DRAFT_24200
Hebeloma cylindrosporum
M413DRAFT_24200
I
0.000
M437DRAFT_88829
Aureobasidium melanogenum
M437DRAFT_88829
I
0.000
M438DRAFT_363827
Aureobasidium pullulans
M438DRAFT_363827
I
0.000
MAC_04053
Metarhizium acridum
MAC_04053
I
0.000
MAJ_08493
Metarhizium majus
MAJ_08493
I
0.000
MAM_07193
Metarhizium album
MAM_07193
I
0.000
MANI_025504
Metarhizium anisopliae
MANI_025504
I
0.000
MAPG_04048
Magnaporthe poae
MAPG_04048
I
0.000
MBM_08533
Marssonina brunnea
MBM_08533
I
0.000
MBR_07220
Metarhizium brunneum
MBR_07220
I
0.000
MCYG_01846
Arthroderma otae
MCYG_01846
I
0.000
MGG_04878
Magnaporthe oryzae
MGG_04878
I
0.000
MGU_06069
Metarhizium guizhouense
MGU_06069
I
0.000
MGYG_04221
Microsporum gypseum
MGYG_04221
I
0.000
MPH_03949
Macrophomina phaseolina
MPH_03949
I
0.000
MYCFIDRAFT_104171
Pseudocercospora fijiensis
MYCFIDRAFT_104171
I
0.000
Mycgr3G74352
Zymoseptoria tritici
Mycgr3G74352
I
0.000
MYCTH_2301553
Myceliophthora thermophila
MYCTH_2301553
I
0.000
NCAS_0D03980
Naumovozyma castellii
NCAS_0D03980
I
0.000
NDAI_0I00930
Naumovozyma dairenensis
NDAI_0I00930
I
0.000
NEUTE1DRAFT_127630
Neurospora tetrasperma
NEUTE1DRAFT_127630
I
0.000
OIDMADRAFT_165409
Oidiodendron maius
OIDMADRAFT_165409
I
0.000
PAAG_04304
Paracoccidioides sp lutzii
PAAG_04304
I
0.000
PABG_04080
Paracoccidioides brasiliensis
PABG_04080
I
0.000
PAS_chr2-1_0025
Komagataella pastoris
PAS_chr2-1_0025
I
0.000
PAXRUDRAFT_826282
Paxillus rubicundulus
PAXRUDRAFT_826282
I
0.000
PCH_Pc21g15950
Penicillium rubens
PCH_Pc21g15950
I
0.000
PDE_09498
Penicillium oxalicum
PDE_09498
I
0.000
PDIP_48900
Penicillium digitatum
PDIP_48900
I
0.000
PEX1_017870
Penicillium expansum
PEX1_017870
I
0.000
PFICI_11606
Pestalotiopsis fici
PFICI_11606
I
0.000
PHACADRAFT_181728
Phanerochaete carnosa
PHACADRAFT_181728
I
0.000
PHLGIDRAFT_35021
Phlebiopsis gigantea
PHLGIDRAFT_35021
I
0.000
PICST_85882
Scheffersomyces stipitis
PICST_85882
I
0.000
PILCRDRAFT_827743
Piloderma croceum
PILCRDRAFT_827743
I
0.000
PISMIDRAFT_516418
Pisolithus microcarpus
PISMIDRAFT_516418
I
0.000
PITC_013420
Penicillium italicum
PITC_013420
I
0.000
PLEOSDRAFT_1064481
Pleurotus ostreatus
PLEOSDRAFT_1064481
I
0.000
PMAA_082150
Talaromyces marneffei
PMAA_082150
I
0.000
PODANS_2_6940
Podospora anserina
PODANS_2_6940
I
0.000
PTRG_11043
Pyrenophora triticirepentis
PTRG_11043
I
0.000
PTT_07707
Pyrenophora teres
PTT_07707
I
0.000
PV04_04630
Capronia semiimmersa
PV04_04630
I
0.000
PV05_02348
Exophiala xenobiotica
PV05_02348
I
0.000
PV06_01624
Exophiala oligosperma
PV06_01624
I
0.000
PV07_05545
Cladophialophora immunda
PV07_05545
I
0.000
PV08_02493
Exophiala spinifera
PV08_02493
I
0.000
PV09_01976
Verruconis gallopava
PV09_01976
I
0.000
PV10_06581
Exophiala mesophila
PV10_06581
I
0.000
PV11_02063
Exophiala sideris
PV11_02063
I
0.000
PVAR5_5506
Byssochlamys spectabilis
PVAR5_5506
I
0.000
S40285_02726
Stachybotrys chlorohalonata
S40285_02726
I
0.000
S40288_09644
Stachybotrys chartarum
S40288_09644
I
0.000
SAPIO_CDS8283
Scedosporium apiospermum
SAPIO_CDS8283
I
0.000
SBOR_1449
Sclerotinia borealis
SBOR_1449
I
0.000
SEPMUDRAFT_46716
Sphaerulina musiva
SEPMUDRAFT_46716
I
0.000
SERLA73DRAFT_159163
Serpula lacrymans
SERLA73DRAFT_159163
I
0.000
SETTUDRAFT_92929
Setosphaeria turcica
SETTUDRAFT_92929
I
0.000
SKUD_186004
Saccharomyces kudriavzevii
SKUD_186004
I
0.000
SMAC_03938
Sordaria macrospora
SMAC_03938
I
0.000
SNOG_11200
Phaeosphaeria nodorum
SNOG_11200
I
0.000
SPAPADRAFT_131982
Spathaspora passalidarum
SPAPADRAFT_131982
I
0.000
SPBR_01187
Sporothrix brasiliensis
SPBR_01187
I
0.000
SS1G_01477
Sclerotinia sclerotiorum
SS1G_01477
I
0.000
SU7_0694
Saccharomyces arboricola
SU7_0694
I
0.000
TEQG_03551
Trichophyton equinum
TEQG_03551
I
0.000
TESG_00566
Trichophyton tonsurans
TESG_00566
I
0.000
THITE_2107776
Thielavia terrestris
THITE_2107776
I
0.000
TPHA_0E02720
Tetrapisispora phaffii
TPHA_0E02720
I
0.000
TRIATDRAFT_229470
Trichoderma atroviride
TRIATDRAFT_229470
I
0.000
TRV_05239
Trichophyton verrucosum
TRV_05239
I
0.000
TSTA_116820
Talaromyces stipitatus
TSTA_116820
I
0.000
U727_00430460301
Penicillium solitum
U727_00430460301
I
0.000
UCRNP2_8300
Neofusicoccum parvum
UCRNP2_8300
I
0.000
UCRPA7_3563
Togninia minima
UCRPA7_3563
I
0.000
UREG_03885
Uncinocarpus reesii
UREG_03885
I
0.000
UV8b_135
Ustilaginoidea virens
UV8b_135
I
0.000
VDAG_09307
Verticillium dahliae
VDAG_09307
I
0.000
VDBG_07586
Verticillium alfalfae
VDBG_07586
I
0.000
VHEMI05600
Torrubiella hemipterigena
VHEMI05600
I
0.000
W97_02158
Coniosporium apollinis
W97_02158
I
0.000
X797_006583
Metarhizium robertsii
X797_006583
I
0.000
YALI0_C16390g
Yarrowia lipolytica
YALI0_C16390g
I
0.000
ECM5
Saccharomyces cerevisiae
YMR176W
I
0.000
Z517_06623
Fonsecaea pedrosoi
Z517_06623
I
0.000
Z518_00744
Rhinocladiella mackenziei
Z518_00744
I
0.000
Z519_00926
Cladophialophora bantiana
Z519_00926
I
0.000
ZBAI_04622
Zygosaccharomyces bailii
ZBAI_04622
I
0.000
ZBAI_06663
Zygosaccharomyces bailii
ZBAI_06663
I
0.000
ZYRO0E07546g
Zygosaccharomyces rouxii
ZYRO0E07546g
I
0.000
estExt_fgenesh2_pg.C_10495
Neurospora discreta
estExt_fgenesh2_pg.C_10495
I
0.000
estExt_Genewise1Plus.C_70765
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_70765
I
0.000
estExt_Genewise1Plus.C_chr_80065
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_80065
I
0.000
estExt_gwp_genewisePlus_human.C_chr_1.10215
Pichia stipitis
estExt_gwp_genewisePlus_human.C_chr_1.10215
I
0.000
fgenesh1_pg.C_scaffold_2000567
Mycosphaerella fijiensis
fgenesh1_pg.C_scaffold_2000567
I
0.000
gww2.2.61.1
Phanerochaete chrysosporium
gww2.2.61.1
I
0.000
Scas_Contig720.39
Saccharomyces castellii
Scas_Contig720.39
I
0.000
16628_YMR176W
Saccharomyces paradoxus
16628_YMR176W
I
0.000
17061_Multiple
Saccharomyces mikatae
17061_Multiple
I
0.000
18935_YMR176W
Saccharomyces bayanus
18935_YMR176W
I
0.000
AB01205.1
Alternaria brassicicola
AB01205.1
I
0.000
estExt_fgenesh1_pg.C_11736
Cryphonectria parasitica
estExt_fgenesh1_pg.C_11736
I
0.000
fgenesh1_pg.00153_#_202
Aspergillus carbonarius
fgenesh1_pg.00153_#_202
I
0.000
KLTH0H03410g
Kluyveromyces thermotolerans
KLTH0H03410g
I
0.000
Kwal_24206
Kluyveromyces waltii
Kwal_24206
I
0.000
Pc21g15950
Penicillium chrysogenum
Pc21g15950
I
0.000
PMAA_082150
Penicillium marneffei
PMAA_082150
I
0.000
SAKL0A03674g
Lachancea kluyveri
SAKL0A03674g
I
0.000
XP_002490905.1
Pichia pastoris
XP_002490905.1
I
0.000
M378DRAFT_20771
Amanita muscaria
M378DRAFT_20771
N
0.000
Moror_15123
Moniliophthora roreri
Moror_15123
N
0.000
MPER_01082
Moniliophthora perniciosa
MPER_01082
N
0.000
RPRC014399
Rhodnius prolixus
RPRC014399
N
0.000
LLOJ009523
Lutzomyia longipalpis
LLOJ009523
N
0.000