Carubv10009727m.g (Capsella rubella)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Carubv10009727m.g T297491_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC005
M07163_2.00 		Arabidopsis thaliana
WWNCTTVYNHHNYAAGTWW
WWACTTRNDDNRBAAGNWW		 Dap-seq
OMalley et al.(2016)
ANAC005_col_a 		0.885 0.667
NAC004
M07161_2.00 		Arabidopsis thaliana
CTTVYNYNRYAAGY
RCTTRYNRNRBAAG		 Dap-seq
OMalley et al.(2016)
ANAC004_col_a 		0.882 0.586
NAC004
M07162_2.00 		Arabidopsis thaliana
WVCTTVYNBNRYAAGYWWBNN
NNVWWRCTTRYNVNRBAAGBW		 Dap-seq
OMalley et al.(2016)
ANAC004_colamp_a 		0.882 0.586
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10009727m NAC/NAM 9 138

Links

Other NAC/NAM family TFs
Other Capsella rubella TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GF14766 Drosophila ananassae FBgn0091793 N
AALB001928 Anopheles albimanus AALB001928 N
AARA005097 Anopheles arabiensis AARA005097 N
ACHR006356 Anopheles christyi ACHR006356 N
ADIR011047 Anopheles dirus ADIR011047 N
AEPI001931 Anopheles epiroticus AEPI001931 N
AFUN003783 Anopheles funestus AFUN003783 N
AMIN006239 Anopheles minimus AMIN006239 N