evm.TU.supercontig_29.118 (Carica papaya)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 evm.TU.supercontig_29.118 T297861_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC007
M07164_2.00 		Arabidopsis thaliana
TTRCKTVHDNNNYAMG
CKTRNNNHDBAMGYAA		 Dap-seq
OMalley et al.(2016)
VND4_colamp_a 		0.953 0.921
NAC007
M07165_2.00 		Arabidopsis thaliana
TGCKTVHDNHDYAMG
CKTRHDNHDBAMGCA		 Dap-seq
OMalley et al.(2016)
VND4_col 		0.953 0.921
NAC037
M07187_2.00 		Arabidopsis thaliana
CKTVNDNHNYAMG
CKTRNDNHNBAMG		 Dap-seq
OMalley et al.(2016)
VND1_col_a 		0.936 0.877
ANAC076
M07224_2.00 		Arabidopsis thaliana
TRCKTVHNNHNYAMG
CKTRNDNNDBAMGYA		 Dap-seq
OMalley et al.(2016)
VND2_col_a 		0.932 0.877
ANAC076
M07225_2.00 		Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN
NNNDTDRCKTRNDNNDBAMGCAA		 Dap-seq
OMalley et al.(2016)
VND2_colamp_a 		0.932 0.877
OS06G0131700
M02378_2.00 		Oryza sativa
NNNNHMDNND
HNNHKDNNNN		 PBM
Weirauch et al.(2014)
pTH8356 		0.885 0.825
NAC105
M00980_2.00 		Arabidopsis thaliana
NYWHKNHWNN
NNWDNMDWRN		 PBM
Lindemose et al.(2014)
VND3 		0.873 0.833
NAC105
M07245_2.00 		Arabidopsis thaliana
NTTGCTTVNNNHNYAMG
CKTRNDNNNBAAGCAAN		 Dap-seq
OMalley et al.(2016)
VND3_colamp_a 		0.873 0.833
NAC105
M07246_2.00 		Arabidopsis thaliana
TTGCTTVHNNHNYAMG
CKTRNDNNDBAAGCAA		 Dap-seq
OMalley et al.(2016)
VND3_col 		0.873 0.833
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_29.118 NAC/NAM 8 135

Links

Other NAC/NAM family TFs
Other Carica papaya TFs

346 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PXEA_0001247401 Protopolystoma xenopodis PXEA_0001247401 N 0.000
TTAC_0000732001 Hydatigera taeniaeformis TTAC_0000732001 N 0.000
TsM_000748400 Taenia solium TsM_000748400 N 0.000
TRE_0001157701 Trichobilharzia regenti TRE_0001157701 N 0.000
TASK_0000020501 Taenia asiatica TASK_0000020501 N 0.000
T265_01358 Opisthorchis viverrini T265_01358 N 0.000
SSLN_0000459001 Schistocephalus solidus SSLN_0000459001 N 0.000
SROB_0001082601 Schistosoma rodhaini SROB_0001082601 N 0.000
SPER_0000847701 Spirometra erinaceieuropaei SPER_0000847701 N 0.000
SMTD_0001334601 Schistosoma mattheei SMTD_0001334601 N 0.000
SMRZ_0001877501 Schistosoma margrebowiei SMRZ_0001877501 N 0.000
SCUD_0001455301 Schistosoma curassoni SCUD_0001455301 N 0.000
Smp_049160 Schistosoma mansoni Smp_049160 N 0.000
MCOS_0000679701 Mesocestoides corti MCOS_0000679701 N 0.000
HNAJ_0000042001 Hymenolepis nana HNAJ_0000042001 N 0.000
HmN_000033300 Hymenolepis microstoma HmN_000033300 N 0.000
HDID_0000598801 Hymenolepis diminuta HDID_0000598801 N 0.000
EmuJ_000778700 Echinococcus multilocularis EmuJ_000778700 N 0.000
DILT_0000577901 Diphyllobothrium latum DILT_0000577901 N 0.000
D915_11842 Fasciola hepatica D915_11842 N 0.000
csin108921 Clonorchis sinensis csin108921 N 0.000
A_03828 Schistosoma haematobium A_03828 N 0.000
Sjc_0067240 Schistosoma japonicum Sjc_0067240 N 0.000