CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_37.112
(
Carica papaya
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
evm.TU.supercontig_37.112
T297868_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NTL9
M02371_2.00
Arabidopsis thaliana
ATTACTTAA
TTAAGTAAT
PBM
Weirauch et al.(2014)
pTH8207
0.911
0.851
NTL9
M11081_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBNAC_01
0.911
0.851
NTL9
M11082_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBNAC_02
0.911
0.851
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_37.112
NAC/NAM
10
136
PLGFRFRPTDEELINHYLRSKINGRDSEVQVIPEVDVCKWEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGHRSNRATDAGYWKATGKDRTIKSRKALVGMKKTLVFYRGRAPKGQRTNWIMHEYRA
Links
Other
NAC/NAM
family TFs
Other
Carica papaya
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PV05_07389
Exophiala xenobiotica
PV05_07389
N
Z519_10931
Cladophialophora bantiana
Z519_10931
N
Z518_02678
Rhinocladiella mackenziei
Z518_02678
N
Z517_00123
Fonsecaea pedrosoi
Z517_00123
N
PV11_03885
Exophiala sideris
PV11_03885
N
PV10_03380
Exophiala mesophila
PV10_03380
N
PV08_03598
Exophiala spinifera
PV08_03598
N
PV07_02524
Cladophialophora immunda
PV07_02524
N
PV06_07760
Exophiala oligosperma
PV06_07760
N
A1O1_07037
Capronia coronata
A1O1_07037
N
PV04_02242
Capronia semiimmersa
PV04_02242
N
HMPREF1541_00993
Cyphellophora europaea
HMPREF1541_00993
N
HMPREF1120_04556
Exophiala dermatitidis
HMPREF1120_04556
N
G647_09859
Cladophialophora carrionii
G647_09859
N
A1O7_02048
Cladophialophora yegresii
A1O7_02048
N
A1O5_10265
Cladophialophora psammophila
A1O5_10265
N
A1O3_04326
Capronia epimyces
A1O3_04326
N