CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Gorai.010G151400 *(Gossypium raimondii)* NAC/NAM
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF02365 (NAM)	IPR003441	Gorai.010G151400	T298155_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
NAC025 M02368_2.00	Arabidopsis thaliana	YACGYAAY	RTTRCGTR	PBM Weirauch et al.(2014) pTH7656	0.905	0.893
NAC018 M07176_2.00	Arabidopsis thaliana	DYACGBMAYYD	HRRTKVCGTRH	Dap-seq OMalley et al.(2016) NAM_colamp_a	0.900	0.866
NAC018 M07177_2.00	Arabidopsis thaliana	WDNCKWNHNNNWYACGBMA	TKVCGTRWNNNDNWMGNHW	Dap-seq OMalley et al.(2016) NAM_col_v3a	0.900	0.866
For this family, TFs with SR scores > 0.870* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Gorai.010G151400.1	NAC/NAM	16	142	PPGFRFHPTDEELVVHYLKRKVASVPLPVTIIAAVDLYKFDPWELPNKASFGEQEWYFFSPRDRKYPNGARPNRATTSGYWKATGTDKPIITSNGNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRL

Links
Other NAC/NAM family TFs
Other *Gossypium raimondii* TFs