CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10003333.g
(
Linum usitatissimum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Lus10003333.g
T298196_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10003333
NAC/NAM
17
145
LPGFRFHPTEEELIDFYLNNMVFGKKLSLDVIGYLNIYRYDPRDLPKLAKINGEREWYFIVPRDRKHGGNGRPNRTTEKGFWKATGSDRKIWRLSEPKRQIGLRKTLVFYQGRAPKGIKTDWVMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Linum usitatissimum
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.18351s0165
Boechera stricta
Bostr.18351s0165
N
0.913
Thhalv10022800m.g
Eutrema salsugineum
Thhalv10022800m.g
N
0.914
SapurV1A.0218s0020
Salix purpurea
SapurV1A.0218s0020
N
0.926
SapurV1A.0080s0480
Salix purpurea
SapurV1A.0080s0480
N
0.931
MDP0000868556
Malus domestica
MDP0000868556
N
0.892
MDP0000480581
Malus domestica
MDP0000480581
N
0.892
Lus10025118.g
Linum usitatissimum
Lus10025118.g
N
0.953
Lus10023966.g
Linum usitatissimum
Lus10023966.g
N
0.955
Lus10022636.g
Linum usitatissimum
Lus10022636.g
N
0.972
Gorai.008G038800
Gossypium raimondii
Gorai.008G038800
N
0.875
Gorai.005G257800
Gossypium raimondii
Gorai.005G257800
N
0.916
evm.TU.supercontig_320.2
Carica papaya
evm.TU.supercontig_320.2
N
0.877
Eucgr.I01494
Eucalyptus grandis
Eucgr.I01494
N
0.896
Carubv10014350m.g
Capsella rubella
Carubv10014350m.g
N
0.919
Cagra.0805s0005
Capsella grandiflora
Cagra.0805s0005
N
0.919
anac036
Arabidopsis thaliana
AT2G17040
N
0.894
cassava30341.valid.m1
Manihot esculenta
cassava30341.valid.m1
N
0.928
cassava13355.valid.m1
Manihot esculenta
cassava13355.valid.m1
N
0.934
29797.m000353
Ricinus communis
29797.m000353
N
0.883
Pm020961
Prunus mume
Pm020961
N
0.873
TCM_006499
Theobroma cacao
TCM_006499
N
0.892
PRUPE_ppa009455mg
Prunus persica
PRUPE_ppa009455mg
N
0.873
POPTR_0009s14370
Populus trichocarpa
POPTR_0009s14370
N
0.927
POPTR_0004s18860
Populus trichocarpa
POPTR_0004s18860
N
0.933
anac036
Arabidopsis lyrata
fgenesh2_kg.3__3291__AT2G17040.1
N
0.894
Bra013034
Brassica rapa
Bra013034
N
0.894
Bra002018
Brassica rapa
Bra002018
N
0.884
Bo7g015050
Brassica oleracea
Bo7g015050
N
0.907
Bo3g092020
Brassica oleracea
Bo3g092020
N
0.894