CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000404409
(
Malus domestica
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
MDP0000404409
T298546_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC025
M02368_2.00
Arabidopsis thaliana
YACGYAAY
RTTRCGTR
PBM
Weirauch et al.(2014)
pTH7656
0.879
0.786
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000404409
NAC/NAM
30
157
PPGFRFHPTDEELILHYLVKKVACTPLPVSVIAEVDIYKFDPWQLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVAPSGRRQNVGVKKALVFYKGRPPKGIKTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Malus domestica
TFs
124 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L596_g13279
Steinernema carpocapsae
L596_g13279
N
L889_g13009
Steinernema feltiae
L889_g13009
N
L889_g9154
Steinernema feltiae
L889_g9154
N
L892_g30447
Steinernema scapterisci
L892_g30447
N
L893_g11797
Steinernema glaseri
L893_g11797
N
L898_g15276
Steinernema monticolum
L898_g15276
N
L898_g32484
Steinernema monticolum
L898_g32484
N