Pavir.Ab03009 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Ab03009 T298759_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.885 0.702
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.885 0.702
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ab03009.1.p NAC/NAM 20 155

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PVAR5_4132 Byssochlamys spectabilis PVAR5_4132 N 0.000
Mycgr3G107497 Zymoseptoria tritici Mycgr3G107497 N 0.000
PAAG_04399 Paracoccidioides sp lutzii PAAG_04399 N 0.000
PABG_04201 Paracoccidioides brasiliensis PABG_04201 N 0.000
PMAA_027450 Talaromyces marneffei PMAA_027450 N 0.000
PTRG_00938 Pyrenophora triticirepentis PTRG_00938 N 0.000
PTT_04046 Pyrenophora teres PTT_04046 N 0.000
PV04_06890 Capronia semiimmersa PV04_06890 N 0.000
PV05_09061 Exophiala xenobiotica PV05_09061 N 0.000
PV06_02579 Exophiala oligosperma PV06_02579 N 0.000
PV07_03724 Cladophialophora immunda PV07_03724 N 0.000
PV07_12548 Cladophialophora immunda PV07_12548 N 0.000
PV08_11376 Exophiala spinifera PV08_11376 N 0.000
PV09_02366 Verruconis gallopava PV09_02366 N 0.000
PV10_08689 Exophiala mesophila PV10_08689 N 0.000
PV11_06703 Exophiala sideris PV11_06703 N 0.000
MPH_03233 Macrophomina phaseolina MPH_03233 N 0.000
SBOR_0679 Sclerotinia borealis SBOR_0679 N 0.000
SEPMUDRAFT_145925 Sphaerulina musiva SEPMUDRAFT_145925 N 0.000
SETTUDRAFT_98045 Setosphaeria turcica SETTUDRAFT_98045 N 0.000
TSTA_071310 Talaromyces stipitatus TSTA_071310 N 0.000
UCRNP2_8887 Neofusicoccum parvum UCRNP2_8887 N 0.000
W97_00412 Coniosporium apollinis W97_00412 N 0.000
Z517_00960 Fonsecaea pedrosoi Z517_00960 N 0.000
Z518_02769 Rhinocladiella mackenziei Z518_02769 N 0.000
Z519_03993 Cladophialophora bantiana Z519_03993 N 0.000
estExt_fgenesh1_kg.C_60062 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_60062 N 0.000
estExt_fgenesh1_pg.C_chr_11225 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_11225 N 0.000
fgenesh1_pg.C_scaffold_1000709 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_1000709 N 0.000
AB07644.1 Alternaria brassicicola AB07644.1 N 0.000
fgenesh1_pg.00609_#_575 Aspergillus carbonarius fgenesh1_pg.00609_#_575 N 0.000
PMAA_027450 Penicillium marneffei PMAA_027450 N 0.000
COCCADRAFT_28724 Bipolaris zeicola COCCADRAFT_28724 N 0.000
A1O3_05959 Capronia epimyces A1O3_05959 N 0.000
A1O5_08664 Cladophialophora psammophila A1O5_08664 N 0.000
A1O7_06479 Cladophialophora yegresii A1O7_06479 N 0.000
A1O9_08053 Exophiala aquamarina A1O9_08053 N 0.000
BAUCODRAFT_118710 Baudoinia compniacensis BAUCODRAFT_118710 N 0.000
Bcin01g08080 Botrytis cinerea Bcin01g08080 N 0.000
BDDG_08069 Blastomyces dermatitidis BDDG_08069 N 0.000
ACLA_045490 Aspergillus clavatus CADACLAG00004978 N 0.000
CADAFLAG00005113 Aspergillus flavus CADAFLAG00005113 N 0.000
CADANGAG00003756 Aspergillus niger CADANGAG00003756 N 0.000
ANIA_04324 Aspergillus nidulans CADANIAG00006139 N 0.000
CADAORAG00008051 Aspergillus oryzae CADAORAG00008051 N 0.000
ATEG_06807 Aspergillus terreus CADATEAG00006231 N 0.000
NFIA_109970 Neosartorya fischeri CADNFIAG00009928 N 0.000
COCC4DRAFT_129366 Bipolaris maydis COCC4DRAFT_129366 N 0.000
A1O1_06448 Capronia coronata A1O1_06448 N 0.000
COCMIDRAFT_26299 Bipolaris oryzae COCMIDRAFT_26299 N 0.000
COCSADRAFT_39300 Bipolaris sorokiniana COCSADRAFT_39300 N 0.000
COCVIDRAFT_18953 Bipolaris victoriae COCVIDRAFT_18953 N 0.000
CSUB01_08232 Colletotrichum sublineola CSUB01_08232 N 0.000
DOTSEDRAFT_68488 Dothistroma septosporum DOTSEDRAFT_68488 N 0.000
EURHEDRAFT_516818 Aspergillus ruber EURHEDRAFT_516818 N 0.000
G647_06053 Cladophialophora carrionii G647_06053 N 0.000
GMDG_02083 Pseudogymnoascus destructans GMDG_02083 N 0.000
GMDG_03916 Pseudogymnoascus destructans GMDG_03916 N 0.000
GSTUM_00009240001 Tuber melanosporum GSTUM_00009240001 N 0.000
HCBG_02231 Histoplasma capsulatum HCBG_02231 N 0.000
HMPREF1120_03961 Exophiala dermatitidis HMPREF1120_03961 N 0.000
LEMA_P055360.1 Leptosphaeria maculans LEMA_P055360.1 N 0.000
MBM_05804 Marssonina brunnea MBM_05804 N 0.000