CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ea02202
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.Ea02202
T298819_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ea02202.1.p
NAC/NAM
19
153
TDLAAHPSEEELITSFLRPRLGGAPRPRAFIHDADVYSAGPAELTRGFDPAVAGNGDRAWYFFSAVRAKNRDGQRKARTVGSGEEAGCWHSEAGARPVVDGAGRCLGHRRSFSFVTRAAGGRRVRSGWLMVELGL
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA018048
Oryza indica
BGIOSGA018048
I
0.891
OBART05G16540
Oryza barthii
OBART05G16540
I
0.891
OGLUM05G17550
Oryza glumaepatula
OGLUM05G17550
I
0.891
ONIVA05G17220
Oryza nivara
ONIVA05G17220
I
0.891
OPUNC05G14600
Oryza punctata
OPUNC05G14600
I
0.891
ORGLA05G0143100
Oryza glaberrima
ORGLA05G0143100
I
0.891
ORUFI05G17750
Oryza rufipogon
ORUFI05G17750
I
0.891
OS05G0415400
Oryza sativa
OS05G0415400
I
0.891
Si036303m.g
Setaria italica
Si036303m.g
I
0.911
Pavir.Ia03443
Panicum virgatum
Pavir.Ia03443
I
0.897
Pavir.Ib01528
Panicum virgatum
Pavir.Ib01528
I
0.909
GRMZM2G163843
Zea mays
GRMZM2G163843
N
0.871