CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J02276
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.J02276
T298924_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J02276.1.p
NAC/NAM
7
140
PPGYRFYPTEEELICFYLRNKLDSLRDDIERVIPVVDVYSVDPWQLPDIHEMLCGGAGAGEPWFYFCPRQEREARGGRPSRTTPSGYWKAAGTPGVVYSSADRRAIGVKKTMVFYRGRAPSGAKTKYKMNEYRA
Pavir.J02276.2.p
NAC/NAM
3
83
CGGAGAGEPWFYFCPRQEREARGGRPSRTTPSGYWKAAGTPGVVYSSADRRAIGVKKTMVFYRGRAPSGAKTKYKMNEYRA
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
107 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CG15696
Drosophila melanogaster
FBgn0038833
D
NEMVEDRAFT_v1g80394
Nematostella vectensis
NEMVEDRAFT_v1g80394
D
GJ22956
Drosophila virilis
FBgn0210059
I
D915_03631
Fasciola hepatica
D915_03631
I
A_06265
Schistosoma haematobium
A_06265
I
MDOA010523
Musca domestica
MDOA010523
I
LCUP001362
Lucilia cuprina
LCUP001362
I
YQE_12606
Dendroctonus ponderosae
YQE_12606
I
TriadG51739
Trichoplax adhaerens
TriadG51739
I
tetur05g02800
Tetranychus urticae
tetur05g02800
I
TC015928
Tribolium castaneum
TC015928
I
Smp_000075
Schistosoma mansoni
Smp_000075
I
M896_041420
Ordospora colligata
M896_041420
I
LotgiG169884
Lottia gigantea
LotgiG169884
I
H311_03552
Anncaliia algerae
H311_03552
I
GK22474
Drosophila willistoni
FBgn0224451
I
ACYPI28321
Acyrthosiphon pisum
ACYPI28321
I
GM23140
Drosophila sechellia
FBgn0178008
I
GL24283
Drosophila persimilis
FBgn0161873
I
GI10602
Drosophila mojavensis
FBgn0133366
I
GH15916
Drosophila grimshawi
FBgn0123387
I
GF17994
Drosophila ananassae
FBgn0095012
I
GG24188
Drosophila erecta
FBgn0085045
I
GE25692
Drosophila yakuba
FBgn0084486
I
GA13896
Drosophila pseudoobscura
FBgn0073928
I
EROM_040930
Encephalitozoon romaleae
EROM_040930
I
Eint_040940
Encephalitozoon intestinalis
Eint_040940
I
EHEL_040890
Encephalitozoon hellem
EHEL_040890
I
EDEG_02526
Edhazardia aedis
EDEG_02526
I