CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J18990
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.J18990
T298975_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J18990.1.p
NAC/NAM
7
133
PPGFRFHPTDLELCSYYLKRKIMGKKLLVEAISEVELYKYAPWDLPDKSCLQSRDMEWYFFCPRDKKYANGSRTNRSTPFGFWKSTGKDRTIVLNTRIVGMKKTLIFHEGKAPRGDRTDWVMYEYRM
Pavir.J18990.2.p
NAC/NAM
7
133
PPGFRFHPTDLELCSYYLKRKIMGKKLLVEAISEVELYKYAPWDLPDKSCLQSRDMEWYFFCPRDKKYANGSRTNRSTPFGFWKSTGKDRTIVLNTRIVGMKKTLIFHEGKAPRGDRTDWVMYEYRM
Pavir.J18990.3.p
NAC/NAM
7
133
PPGFRFHPTDLELCSYYLKRKIMGKKLLVEAISEVELYKYAPWDLPDKSCLQSRDMEWYFFCPRDKKYANGSRTNRSTPFGFWKSTGKDRTIVLNTRIVGMKKTLIFHEGKAPRGDRTDWVMYEYRM
Pavir.J18990.4.p
NAC/NAM
7
133
PPGFRFHPTDLELCSYYLKRKIMGKKLLVEAISEVELYKYAPWDLPDKSCLQSRDMEWYFFCPRDKKYANGSRTNRSTPFGFWKSTGKDRTIVLNTRIVGMKKTLIFHEGKAPRGDRTDWVMYEYRM
Pavir.J18990.5.p
NAC/NAM
7
133
PPGFRFHPTDLELCSYYLKRKIMGKKLLVEAISEVELYKYAPWDLPDKSCLQSRDMEWYFFCPRDKKYANGSRTNRSTPFGFWKSTGKDRTIVLNTRIVGMKKTLIFHEGKAPRGDRTDWVMYEYRM
Pavir.J18990.6.p
NAC/NAM
7
133
PPGFRFHPTDLELCSYYLKRKIMGKKLLVEAISEVELYKYAPWDLPDKSCLQSRDMEWYFFCPRDKKYANGSRTNRSTPFGFWKSTGKDRTIVLNTRIVGMKKTLIFHEGKAPRGDRTDWVMYEYRM
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
col-22
Neurospora crassa
NCU04390
D
SPBR_05511
Sporothrix brasiliensis
SPBR_05511
I
VDBG_00800
Verticillium albo atrum
VDBG_00800
I
MGU_10634
Metarhizium guizhouense
MGU_10634
I
MYCTH_2299337
Myceliophthora thermophila
MYCTH_2299337
I
NechaG66570
Fusarium solani
NechaG66570
I
NEUTE1DRAFT_60791
Neurospora tetrasperma
NEUTE1DRAFT_60791
I
PODANS_3_3810
Podospora anserina
PODANS_3_3810
I
PVAR5_1489
Byssochlamys spectabilis
PVAR5_1489
I
S40285_05724
Stachybotrys chlorohalonata
S40285_05724
I
S40288_08454
Stachybotrys chartarum
S40288_08454
I
SAPIO_CDS7052
Scedosporium apiospermum
SAPIO_CDS7052
I
SMAC_01754
Sordaria macrospora
SMAC_01754
I
MBR_07954
Metarhizium brunneum
MBR_07954
I
TRIATDRAFT_266867
Trichoderma atroviride
TRIATDRAFT_266867
I
TRIVIDRAFT_192982
Trichoderma virens
TRIVIDRAFT_192982
I
UCRPA7_6855
Togninia minima
UCRPA7_6855
I
UV8b_1050
Ustilaginoidea virens
UV8b_1050
I
VDBG_00800
Verticillium alfalfae
VDBG_00800
I
VHEMI03392
Torrubiella hemipterigena
VHEMI03392
I
X797_008007
Metarhizium robertsii
X797_008007
I
estExt_Genewise1.C_30584
Neurospora discreta
estExt_Genewise1.C_30584
I
estExt_Genewise1Plus.C_sca_18_chr2_1_01639
Nectria haematococca
estExt_Genewise1Plus.C_sca_18_chr2_1_01639
I
estExt_fgenesh1_pg.C_30899
Cryphonectria parasitica
estExt_fgenesh1_pg.C_30899
I
F503_05042
Ophiostoma piceae uamh
F503_05042
I
ACRE_019720
Acremonium chrysogenum
ACRE_019720
I
BBA_05197
Beauveria bassiana
BBA_05197
I
CFIO01_00482
Colletotrichum fioriniae
CFIO01_00482
I
CGGC5_12955
Colletotrichum gloeosporioides
CGGC5_12955
I
CH063_14099
Colletotrichum higginsianum
CH063_14099
I
CHGG_04873
Chaetomium globosum
CHGG_04873
I
CMQ_895
Grosmannia clavigera
CMQ_895
I
Cob_03852
Colletotrichum orbiculare
Cob_03852
I
CSUB01_05797
Colletotrichum sublineola
CSUB01_05797
I
CTHT_0030250
Chaetomium thermophilum
CTHT_0030250
I
MANI_028168
Metarhizium anisopliae
MANI_028168
I
FFUJ_04464
Fusarium fujikuroi
FFUJ_04464
I
FGRRES_09594
Fusarium graminearum
FGRRES_09594
I
FOXG_06298
Fusarium oxysporum
FOXG_06298
I
FPSE_05872
Fusarium pseudograminearum
FPSE_05872
I
FVEG_04149
Fusarium verticillioides
FVEG_04149
I
GLRG_08311
Colletotrichum graminicola
GLRG_08311
I
HMPREF1624_04110
Sporothrix schenckii
HMPREF1624_04110
I
MAC_09133
Metarhizium acridum
MAC_09133
I
MAJ_04708
Metarhizium majus
MAJ_04708
I
MAM_06160
Metarhizium album
MAM_06160
I
OIDMADRAFT_182984
Oidiodendron maius
OIDMADRAFT_182984
N
ANIA_11098
Aspergillus nidulans
CADANIAG00006453
N