CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J24268
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.J24268
T298989_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J24268.1.p
NAC/NAM
12
145
PPGLNFHPNDDELVEFFLLPTVRGEPAWRHRHPRRDTAGNALPWKLLERHGLAGDDEAYFFVRTKQDATKEAARQDRYCAGGARWVSQRPVFGASCIGGERIEWRRINLNLQMGRGRSGGGSGSTGWVMHEYTL
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GA10296
Drosophila pseudoobscura
FBgn0070354
I
0.000
GG21703
Drosophila erecta
FBgn0113881
I
0.000
GH10530
Drosophila grimshawi
FBgn0118011
I
0.000
GI17198
Drosophila mojavensis
FBgn0139942
I
0.000
GL18743
Drosophila persimilis
FBgn0156344
I
0.000
GM17083
Drosophila sechellia
FBgn0171995
I
0.000
GD21828
Drosophila simulans
FBgn0193248
I
0.000
GJ19805
Drosophila virilis
FBgn0206947
I
0.000
GK24655
Drosophila willistoni
FBgn0226615
I
0.000
GE12726
Drosophila yakuba
FBgn0230450
I
0.000
PHUM221110
Pediculus humanus
PHUM221110
I
0.000
LCUP012116
Lucilia cuprina
LCUP012116
I
0.000
MDOA000520
Musca domestica
MDOA000520
I
0.000