PK23416.1 (Cannabis sativa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 PK23416.1 T299357_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC007
M07164_2.00 		Arabidopsis thaliana
TTRCKTVHDNNNYAMG
CKTRNNNHDBAMGYAA		 Dap-seq
OMalley et al.(2016)
VND4_colamp_a 		0.946 0.912
NAC007
M07165_2.00 		Arabidopsis thaliana
TGCKTVHDNHDYAMG
CKTRHDNHDBAMGCA		 Dap-seq
OMalley et al.(2016)
VND4_col 		0.946 0.912
NAC037
M07187_2.00 		Arabidopsis thaliana
CKTVNDNHNYAMG
CKTRNDNHNBAMG		 Dap-seq
OMalley et al.(2016)
VND1_col_a 		0.939 0.886
ANAC076
M07224_2.00 		Arabidopsis thaliana
TRCKTVHNNHNYAMG
CKTRNDNNDBAMGYA		 Dap-seq
OMalley et al.(2016)
VND2_col_a 		0.929 0.868
ANAC076
M07225_2.00 		Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN
NNNDTDRCKTRNDNNDBAMGCAA		 Dap-seq
OMalley et al.(2016)
VND2_colamp_a 		0.929 0.868
OS06G0131700
M02378_2.00 		Oryza sativa
NNNNHMDNND
HNNHKDNNNN		 PBM
Weirauch et al.(2014)
pTH8356 		0.895 0.825
NAC105
M00980_2.00 		Arabidopsis thaliana
NYWHKNHWNN
NNWDNMDWRN		 PBM
Lindemose et al.(2014)
VND3 		0.878 0.842
NAC105
M07245_2.00 		Arabidopsis thaliana
NTTGCTTVNNNHNYAMG
CKTRNDNNNBAAGCAAN		 Dap-seq
OMalley et al.(2016)
VND3_colamp_a 		0.878 0.842
NAC105
M07246_2.00 		Arabidopsis thaliana
TTGCTTVHNNHNYAMG
CKTRNDNNDBAAGCAA		 Dap-seq
OMalley et al.(2016)
VND3_col 		0.878 0.842
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK23416.1 NAC/NAM 19 146

Links

Other NAC/NAM family TFs
Other Cannabis sativa TFs

350 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SELMODRAFT_39481 Selaginella moellendorffii SELMODRAFT_39481 I
LjT15F17.90.nd Lotus japonicus LjT15F17.90.nd I
SELMODRAFT_39454 Selaginella moellendorffii SELMODRAFT_39454 I
PGSC0003DMG400006176 Solanum tuberosum PGSC0003DMG400006176 I
MLOC_69570 Hordeum vulgare MLOC_69570 I
F775_04823 Aegilops tauschii F775_04823 I
GRMZM2G077789 Zea mays GRMZM2G077789 I
GRMZM2G000818 Zea mays GRMZM2G000818 I
GRMZM2G124715 Zea mays GRMZM2G124715 I
TRIUR3_28515 Triticum urartu TRIUR3_28515 N
SapurV1A.3841s0010 Salix purpurea SapurV1A.3841s0010 N
Pavir.J22834 Panicum virgatum Pavir.J22834 N
mgf021550m Mimulus guttatus mgf021550m N
30225.m001697 Ricinus communis 30225.m001697 N
29816.m000664 Ricinus communis 29816.m000664 N
29739.m003608 Ricinus communis 29739.m003608 N
29656.m000479 Ricinus communis 29656.m000479 N
TRIUR3_23036 Triticum urartu TRIUR3_23036 N
AMTR_s00048p00210040 Amborella trichopoda AMTR_s00048p00210040 N
PRUPE_ppa021145mg Prunus persica PRUPE_ppa021145mg N
ORGLA12G0042500 Oryza glaberrima ORGLA12G0042500 N
OB05G25260 Oryza brachyantha OB05G25260 N