CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr1.CM0150.240.nd
(
Lotus japonicus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
chr1.CM0150.240.nd
T299383_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr1.CM0150.240.nd
NAC/NAM
23
154
PPGFRFHPTDEELITFYLASKVFNGTFTTTNVKFAEVDLNRCEPWELPDVAKMGEREWYLFSLRDKKYPTGLRTNRATGAGYWKATGKDKEVYSASSNGEKLLLGMKKTLVFYKGRAPRGEKTRWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Lotus japonicus
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene31474-v1.0-hybrid
Fragaria vesca
gene31474-v1.0-hybrid
I
0.894
Cucsa.272370
Cucumis sativus
Cucsa.272370
I
0.891
mgf018675m
Mimulus guttatus
mgf018675m
I
0.896
mgf023466m
Mimulus guttatus
mgf023466m
I
0.896
Aquca_007_00948
Aquilegia coerulea
Aquca_007_00948
I
0.883
Aquca_015_00272
Aquilegia coerulea
Aquca_015_00272
I
0.874
Ciclev10001403m.g
Citrus clementina
Ciclev10001403m.g
I
0.898
Eucgr.F03588
Eucalyptus grandis
Eucgr.F03588
I
0.886
evm.TU.supercontig_286.12
Carica papaya
evm.TU.supercontig_286.12
I
0.889
cassava21580.m1
Manihot esculenta
cassava21580.m1
I
0.899
Gorai.002G113300
Gossypium raimondii
Gorai.002G113300
I
0.880
Gorai.009G186000
Gossypium raimondii
Gorai.009G186000
I
0.889
Lus10030723.g
Linum usitatissimum
Lus10030723.g
I
0.876
orange1.1g016283m.g
Citrus sinensis
orange1.1g016283m.g
I
0.898
SapurV1A.0016s0340
Salix purpurea
SapurV1A.0016s0340
I
0.897
SapurV1A.0266s0070
Salix purpurea
SapurV1A.0266s0070
I
0.899
Thhalv10019493m.g
Eutrema salsugineum
Thhalv10019493m.g
I
0.877
Bo6g120460
Brassica oleracea
Bo6g120460
I
0.872
cassava21054.m1
Manihot esculenta
cassava21054.m1
I
0.886
30170.m014236
Ricinus communis
30170.m014236
I
0.896
Pm022916
Prunus mume
Pm022916
I
0.886
Cla023834
Citrullus lanatus
Cla023834
I
0.891
CUC3
Vitis vinifera
VIT_18s0122g00800
I
0.899
TCM_034835
Theobroma cacao
TCM_034835
I
0.896
PRUPE_ppa022238mg
Prunus persica
PRUPE_ppa022238mg
I
0.872
POPTR_0005s27720
Populus trichocarpa
POPTR_0005s27720
I
0.899
POPTR_0002s00730
Populus trichocarpa
POPTR_0002s00730
I
0.903
GSMUA_Achr9G20090_001
Musa acuminata
GSMUA_Achr9G20090_001
I
0.880
Bra015750
Brassica rapa
Bra015750
I
0.872
Bra008259
Brassica rapa
Bra008259
I
0.872
Ca_04804
Cicer arietinum
Ca_04804
N
0.989
GLYMA06G01741
Glycine max
GLYMA06G01741
N
0.934
GLYMA04G01651
Glycine max
GLYMA04G01651
N
0.928