CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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si:dkey-10f23.2
(
Gasterosteus aculeatus
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01422 (zf-NF-X1)
IPR000967
ENSGACG00000004560
T300487_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000006031
NFX
101
133
HSCGDMCGKKRSGVDCNHPCNILCHPGPCPQCP
ENSGACP00000006031
NFX
169
187
CAKHTCAQVCHGGACQPCQ
ENSGACP00000006031
NFX
224
248
CGKMLGCEAHRCQLECHSGPCQPCP
ENSGACP00000006031
NFX
295
317
CGSSDTIHLCEKLCHEDSCGPCS
ENSGACP00000006031
NFX
357
368
CGRHKCGELCCV
ENSGACP00000006031
NFX
384
402
CGLHRCEDPCHRGNCEPCW
ENSGACP00000006031
NFX
485
520
CGLTCNKTLPCEMHRCRRICHRAECSAGGGCQQPCA
ENSGACP00000006042
NFX
4
22
CEAHRCQLECHSGPCQPCP
ENSGACP00000006042
NFX
69
91
CGSSDTIHLCEKLCHEDSCGPCS
ENSGACP00000006042
NFX
132
143
CGRHKCGELCCV
ENSGACP00000006042
NFX
159
177
CGLHRCEDPCHRGNCEPCW
ENSGACP00000006042
NFX
260
295
CGLTCNKTLPCEMHRCRRICHRAECSAGGGCQQPCA
Links
Other
NFX
family TFs
Other
Gasterosteus aculeatus
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TGA6
Arabidopsis thaliana
AT3G12250
D
TGA2
Arabidopsis thaliana
AT5G06950
D
TGA5
Arabidopsis thaliana
AT5G06960
D
HBP1B_WHEAT
Triticum aestivum
HBP1B_WHEAT
D
PK09021.1
Cannabis sativa
PK09021.1
D
AMTR_s00031p00017860
Amborella trichopoda
AMTR_s00031p00017860
I
BGIOSGA000624
Oryza indica
BGIOSGA000624
I
BGIOSGA003265
Oryza indica
BGIOSGA003265
I
BGIOSGA007726
Oryza indica
BGIOSGA007726
I
Bo1g139470
Brassica oleracea
Bo1g139470
I
Bo2g007460
Brassica oleracea
Bo2g007460
I
Bo3g064830
Brassica oleracea
Bo3g064830
I
Bo5g133550
Brassica oleracea
Bo5g133550
I
Bo9g175710
Brassica oleracea
Bo9g175710
I
Bra001443
Brassica rapa
Bra001443
I
Bra009241
Brassica rapa
Bra009241
I
Bra028713
Brassica rapa
Bra028713
I
Bra034767
Brassica rapa
Bra034767
I
Bra038705
Brassica rapa
Bra038705
I
BRADI2G10830
Brachypodium distachyon
BRADI2G10830
I
BRADI2G52860
Brachypodium distachyon
BRADI2G52860
I
F775_14171
Aegilops tauschii
F775_14171
I
TGA6
Arabidopsis lyrata
fgenesh2_kg.3__1288__AT3G12250.4
I
AHBP-1B
Arabidopsis lyrata
fgenesh2_kg.6__644__AT5G06950.1
I
OBF5
Arabidopsis lyrata
fgenesh2_kg.6__648__AT5G06960.1
I
GLYMA02G30220
Glycine max
GLYMA02G30220
I
GLYMA03G28320
Glycine max
GLYMA03G28320
I
GLYMA10G11985
Glycine max
GLYMA10G11985
I
GLYMA10G44270
Glycine max
GLYMA10G44270
I
GLYMA11G19026
Glycine max
GLYMA11G19026
I
GLYMA12G09430
Glycine max
GLYMA12G09430
I
GLYMA12G30990
Glycine max
GLYMA12G30990
I
GLYMA13G26280
Glycine max
GLYMA13G26280
I
GLYMA15G37220
Glycine max
GLYMA15G37220
I
GLYMA19G31050
Glycine max
GLYMA19G31050
I
GLYMA20G39050
Glycine max
GLYMA20G39050
I
GRMZM2G019907
Zea mays
GRMZM2G019907
I
GRMZM2G030280
Zea mays
GRMZM2G030280
I
GRMZM2G125243
Zea mays
GRMZM2G125243
I
GSMUA_Achr10G00340_001
Musa acuminata
GSMUA_Achr10G00340_001
I
GSMUA_Achr11G25140_001
Musa acuminata
GSMUA_Achr11G25140_001
I
GSMUA_Achr2G06770_001
Musa acuminata
GSMUA_Achr2G06770_001
I
GSMUA_Achr3G11150_001
Musa acuminata
GSMUA_Achr3G11150_001
I
GSMUA_Achr3G25020_001
Musa acuminata
GSMUA_Achr3G25020_001
I
GSMUA_Achr8G05800_001
Musa acuminata
GSMUA_Achr8G05800_001
I
GSMUA_Achr8G21670_001
Musa acuminata
GSMUA_Achr8G21670_001
I
GSMUA_Achr9G27700_001
Musa acuminata
GSMUA_Achr9G27700_001
I
LPERR01G10700
Leersia perrieri
LPERR01G10700
I
LPERR01G29770
Leersia perrieri
LPERR01G29770
I
LPERR05G17110
Leersia perrieri
LPERR05G17110
I
MLOC_14596
Hordeum vulgare
MLOC_14596
I
MTR_2g086420
Medicago truncatula
MTR_2g086420
I
MTR_7g089800
Medicago truncatula
MTR_7g089800
I
MTR_8g040120
Medicago truncatula
MTR_8g040120
I
OB01G21470
Oryza brachyantha
OB01G21470
I
OB01G43330
Oryza brachyantha
OB01G43330
I
OBART01G11380
Oryza barthii
OBART01G11380
I
OBART01G34430
Oryza barthii
OBART01G34430
I
OBART02G07230
Oryza barthii
OBART02G07230
I
OBART05G21230
Oryza barthii
OBART05G21230
I
OGLUM01G20660
Oryza glumaepatula
OGLUM01G20660
I
OGLUM02G07240
Oryza glumaepatula
OGLUM02G07240
I
OGLUM05G22440
Oryza glumaepatula
OGLUM05G22440
I
OLONG_003165
Oryza longistaminata
OLONG_003165
I
OLONG_010393
Oryza longistaminata
OLONG_010393
I
OLONG_020675
Oryza longistaminata
OLONG_020675
I
OMERI01G31730
Oryza meridionalis
OMERI01G31730
I
OMERI02G08300
Oryza meridionalis
OMERI02G08300
I
ONIVA01G13810
Oryza nivara
ONIVA01G13810
I
ONIVA01G39320
Oryza nivara
ONIVA01G39320
I
ONIVA02G08860
Oryza nivara
ONIVA02G08860
I
ONIVA05G21900
Oryza nivara
ONIVA05G21900
I
OPUNC01G11270
Oryza punctata
OPUNC01G11270
I
OPUNC01G33450
Oryza punctata
OPUNC01G33450
I
OPUNC02G06400
Oryza punctata
OPUNC02G06400
I
OPUNC05G18920
Oryza punctata
OPUNC05G18920
I
ORGLA02G0067600
Oryza glaberrima
ORGLA02G0067600
I
ORUFI01G12420
Oryza rufipogon
ORUFI01G12420
I
ORUFI01G37800
Oryza rufipogon
ORUFI01G37800
I
TGA2.3
Oryza sativa
OS01G0279900
I
OS01G0808100
Oryza sativa
OS01G0808100
I
OS02G0194900
Oryza sativa
OS02G0194900
I
OS05G0492000
Oryza sativa
OS05G0492000
I
PGSC0003DMG400009449
Solanum tuberosum
PGSC0003DMG400009449
I
PGSC0003DMG400012962
Solanum tuberosum
PGSC0003DMG400012962
I
POPTR_0001s06700
Populus trichocarpa
POPTR_0001s06700
I
POPTR_0003s19410
Populus trichocarpa
POPTR_0003s19410
I
POPTR_0006s03720
Populus trichocarpa
POPTR_0006s03720
I
PAN
Populus trichocarpa
POPTR_0008s11710
I
POPTR_0009s16590
Populus trichocarpa
POPTR_0009s16590
I
POPTR_0016s03590
Populus trichocarpa
POPTR_0016s03590
I
PRUPE_ppa003825mg
Prunus persica
PRUPE_ppa003825mg
I
PRUPE_ppa004537mg
Prunus persica
PRUPE_ppa004537mg
I
PRUPE_ppa005279mg
Prunus persica
PRUPE_ppa005279mg
I
PRUPE_ppa019842mg
Prunus persica
PRUPE_ppa019842mg
I
Sb03g006790
Sorghum bicolor
Sb03g006790
I
Sb03g037560
Sorghum bicolor
Sb03g037560
I
Sb04g006500
Sorghum bicolor
Sb04g006500
I
Si001292m.g
Setaria italica
Si001292m.g
I
Si002195m.g
Setaria italica
Si002195m.g
I
Solyc05g009660.2
Solanum lycopersicum
Solyc05g009660.2
I
Solyc11g064950.1
Solanum lycopersicum
Solyc11g064950.1
I
TCM_011845
Theobroma cacao
TCM_011845
I
TCM_023491
Theobroma cacao
TCM_023491
I
TCM_023492
Theobroma cacao
TCM_023492
I
TCM_024862
Theobroma cacao
TCM_024862
I
TCM_041421
Theobroma cacao
TCM_041421
I
Traes_3AL_5490CF370
Triticum aestivum
Traes_3AL_5490CF370
I
TRAES3BF003000030CFD_g
Triticum aestivum
TRAES3BF003000030CFD_g
I
TRAES3BF027700210CFD_g
Triticum aestivum
TRAES3BF027700210CFD_g
I
Traes_3DL_A71427183
Triticum aestivum
Traes_3DL_A71427183
I
Traes_7DS_E5A18AAA4
Triticum aestivum
Traes_7DS_E5A18AAA4
I
TRIUR3_09546
Triticum urartu
TRIUR3_09546
I
TRIUR3_33475
Triticum urartu
TRIUR3_33475
I
PAN
Vitis vinifera
VIT_01s0011g03230
I
TGA9
Vitis vinifera
VIT_06s0080g00360
I
VIT_08s0007g05170
Vitis vinifera
VIT_08s0007g05170
I
TGA10
Vitis vinifera
VIT_08s0007g06160
I
VIT_13s0084g00660
Vitis vinifera
VIT_13s0084g00660
I
VIT_18s0001g04470
Vitis vinifera
VIT_18s0001g04470
I
Ca_07057
Cicer arietinum
Ca_07057
I
Ca_07170
Cicer arietinum
Ca_07170
I
Ca_10901
Cicer arietinum
Ca_10901
I
Ca_17971
Cicer arietinum
Ca_17971
I
Cla002918
Citrullus lanatus
Cla002918
I
Cla008794
Citrullus lanatus
Cla008794
I
Cla010092
Citrullus lanatus
Cla010092
I
Cla017796
Citrullus lanatus
Cla017796
I
Cla022393
Citrullus lanatus
Cla022393
I
Pm001317
Prunus mume
Pm001317
I
Pm016643
Prunus mume
Pm016643
I
Pm025995
Prunus mume
Pm025995
I
Pm028917
Prunus mume
Pm028917
I
Pm029028
Prunus mume
Pm029028
I
29216.m000249
Ricinus communis
29216.m000249
I
30055.m001550
Ricinus communis
30055.m001550
I
30131.m007163
Ricinus communis
30131.m007163
I
cassava13378.valid.m1
Manihot esculenta
cassava13378.valid.m1
I
cassava1426.valid.m1
Manihot esculenta
cassava1426.valid.m1
I
cassava1427.valid.m1
Manihot esculenta
cassava1427.valid.m1
I
cassava22236.valid.m1
Manihot esculenta
cassava22236.valid.m1
I
cassava22237.valid.m1
Manihot esculenta
cassava22237.valid.m1
I
cassava6928.valid.m1
Manihot esculenta
cassava6928.valid.m1
I
Cucsa.005120
Cucumis sativus
Cucsa.005120
I
Cucsa.242870
Cucumis sativus
Cucsa.242870
I
Cucsa.307820
Cucumis sativus
Cucsa.307820
I
Cucsa.337740
Cucumis sativus
Cucsa.337740
I
mgf001395m
Mimulus guttatus
mgf001395m
I
mgf005858m
Mimulus guttatus
mgf005858m
I
mgf025345m
Mimulus guttatus
mgf025345m
I
Aquca_004_00791
Aquilegia coerulea
Aquca_004_00791
I
Aquca_009_00172
Aquilegia coerulea
Aquca_009_00172
I
Aquca_009_00424
Aquilegia coerulea
Aquca_009_00424
I
Bostr.13129s0278
Boechera stricta
Bostr.13129s0278
I
Bostr.13129s0279
Boechera stricta
Bostr.13129s0279
I
Bostr.3640s0002
Boechera stricta
Bostr.3640s0002
I
Cagra.0430s0055
Capsella grandiflora
Cagra.0430s0055
I
Cagra.16209s0003
Capsella grandiflora
Cagra.16209s0003
I
Cagra.16209s0004
Capsella grandiflora
Cagra.16209s0004
I
Carubv10001409m.g
Capsella rubella
Carubv10001409m.g
I
Carubv10001413m.g
Capsella rubella
Carubv10001413m.g
I
Ciclev10001081m.g
Citrus clementina
Ciclev10001081m.g
I
Ciclev10005080m.g
Citrus clementina
Ciclev10005080m.g
I
Ciclev10031361m.g
Citrus clementina
Ciclev10031361m.g
I
Eucgr.A02240
Eucalyptus grandis
Eucgr.A02240
I
Eucgr.A02436
Eucalyptus grandis
Eucgr.A02436
I
Eucgr.B03855
Eucalyptus grandis
Eucgr.B03855
I
Eucgr.G03217
Eucalyptus grandis
Eucgr.G03217
I
Eucgr.J00491
Eucalyptus grandis
Eucgr.J00491
I
Eucgr.K01643
Eucalyptus grandis
Eucgr.K01643
I
evm.TU.supercontig_1.202
Carica papaya
evm.TU.supercontig_1.202
I
evm.TU.supercontig_32.14
Carica papaya
evm.TU.supercontig_32.14
I
evm.TU.supercontig_5.165
Carica papaya
evm.TU.supercontig_5.165
I
evm.TU.supercontig_847.1
Carica papaya
evm.TU.supercontig_847.1
I
evm.TU.supercontig_85.93
Carica papaya
evm.TU.supercontig_85.93
I
gene00517-v1.0-hybrid
Fragaria vesca
gene00517-v1.0-hybrid
I
gene14220-v1.0-hybrid
Fragaria vesca
gene14220-v1.0-hybrid
I
gene21797-v1.0-hybrid
Fragaria vesca
gene21797-v1.0-hybrid
I
gene21882-v1.0-hybrid
Fragaria vesca
gene21882-v1.0-hybrid
I
Gorai.001G122100
Gossypium raimondii
Gorai.001G122100
I
Gorai.002G228200
Gossypium raimondii
Gorai.002G228200
I
Gorai.006G111800
Gossypium raimondii
Gorai.006G111800
I
Gorai.006G141000
Gossypium raimondii
Gorai.006G141000
I
Gorai.007G352600
Gossypium raimondii
Gorai.007G352600
I
Gorai.008G185000
Gossypium raimondii
Gorai.008G185000
I
Gorai.011G217200
Gossypium raimondii
Gorai.011G217200
I
Gorai.013G001700
Gossypium raimondii
Gorai.013G001700
I
Gorai.013G081100
Gossypium raimondii
Gorai.013G081100
I
Lus10008658.g
Linum usitatissimum
Lus10008658.g
I
Lus10024140.g
Linum usitatissimum
Lus10024140.g
I
Lus10026166.g
Linum usitatissimum
Lus10026166.g
I
Lus10034296.g
Linum usitatissimum
Lus10034296.g
I
Lus10041475.g
Linum usitatissimum
Lus10041475.g
I
MDP0000145555
Malus domestica
MDP0000145555
I
MDP0000250967
Malus domestica
MDP0000250967
I
MDP0000262210
Malus domestica
MDP0000262210
I
MDP0000300532
Malus domestica
MDP0000300532
I
MDP0000301884
Malus domestica
MDP0000301884
I
MDP0000307943
Malus domestica
MDP0000307943
I
MDP0000320322
Malus domestica
MDP0000320322
I
MDP0000320524
Malus domestica
MDP0000320524
I
MDP0000536881
Malus domestica
MDP0000536881
I
orange1.1g015258m.g
Citrus sinensis
orange1.1g015258m.g
I
orange1.1g038233m.g
Citrus sinensis
orange1.1g038233m.g
I
orange1.1g045786m.g
Citrus sinensis
orange1.1g045786m.g
I
Pavir.Ea03193
Panicum virgatum
Pavir.Ea03193
I
Pavir.Eb01160
Panicum virgatum
Pavir.Eb01160
I
Pavir.Eb03507
Panicum virgatum
Pavir.Eb03507
I
Pavir.J04905
Panicum virgatum
Pavir.J04905
I
Pavir.J27823
Panicum virgatum
Pavir.J27823
I
SapurV1A.0009s1200
Salix purpurea
SapurV1A.0009s1200
I
SapurV1A.0018s0400
Salix purpurea
SapurV1A.0018s0400
I
SapurV1A.0079s0330
Salix purpurea
SapurV1A.0079s0330
I
SapurV1A.0189s0240
Salix purpurea
SapurV1A.0189s0240
I
SapurV1A.0196s0260
Salix purpurea
SapurV1A.0196s0260
I
SapurV1A.0374s0050
Salix purpurea
SapurV1A.0374s0050
I
SapurV1A.0574s0080
Salix purpurea
SapurV1A.0574s0080
I
SapurV1A.1761s0020
Salix purpurea
SapurV1A.1761s0020
I
Thhalv10014082m.g
Eutrema salsugineum
Thhalv10014082m.g
I
Thhalv10021187m.g
Eutrema salsugineum
Thhalv10021187m.g
I
PK07387.1
Cannabis sativa
PK07387.1
I
PK08582.1
Cannabis sativa
PK08582.1
I
PK13754.1
Cannabis sativa
PK13754.1
I
PK21698.1
Cannabis sativa
PK21698.1
I
chr1.CM0009.80.nd
Lotus japonicus
chr1.CM0009.80.nd
I
PDK_20s1462851g003
Phoenix dactylifera
PDK_20s1462851g003
I