CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400014182
(
Solanum tuberosum
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01422 (zf-NF-X1)
IPR000967
PGSC0003DMG400014182
T300750_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400036773
NFX
26
44
CGNHICRELCHPGPCGDCA
PGSC0003DMT400036773
NFX
84
102
CGVHRCEAVCHSGDCAPCL
PGSC0003DMT400036773
NFX
142
153
CGRHRCSERCCP
PGSC0003DMT400036773
NFX
180
198
CGQHSCESLCHSGHCPPCL
PGSC0003DMT400036773
NFX
290
310
CGLHACARTCHPSPCDVSAGP
PGSC0003DMT400036774
NFX
270
287
CPHVCVLQCHPGPCPPCK
PGSC0003DMT400036774
NFX
325
343
CGRHRCEQTCHVGPCGHCQ
PGSC0003DMT400036774
NFX
389
407
CGNHICRELCHPGPCGDCA
PGSC0003DMT400036774
NFX
447
465
CGVHRCEAVCHSGDCAPCL
PGSC0003DMT400036774
NFX
505
516
CGRHRCSERCCP
PGSC0003DMT400036774
NFX
543
561
CGQHSCESLCHSGHCPPCL
PGSC0003DMT400036774
NFX
653
673
CGLHACARTCHPSPCDVSAGP
Links
Other
NFX
family TFs
Other
Solanum tuberosum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARB_02041
Arthroderma benhamiae
ARB_02041
N
H101_06465
Trichophyton interdigitale
H101_06465
N
H102_07555
Trichophyton rubrum
H102_07555
N
H105_07582
Trichophyton soudanense
H105_07582
N
MCYG_00622
Arthroderma otae
MCYG_00622
N
MGYG_01339
Microsporum gypseum
MGYG_01339
N
TEQG_05491
Trichophyton equinum
TEQG_05491
N
TESG_05755
Trichophyton tonsurans
TESG_05755
N