CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si005790m.g
(
Setaria italica
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01422 (zf-NF-X1)
IPR000967
Si005790m.g
T300799_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si005790m
NFX
117
134
CPHVCVLQCHPGPCPPCK
Si005790m
NFX
162
190
CGRPCERMLPCRRHRCEKVCHTGPCGDCA
Si005790m
NFX
236
254
CGNHVCKDMCHPGPCGECE
Si005790m
NFX
294
312
CGVHRCKVNCHEGECPPCL
Si005790m
NFX
389
407
CGQHACQLLCHSGHCPPCL
Si005790m
NFX
446
463
CGHPASHSCHFGDCPPCV
Si005790m
NFX
499
517
CGIHACNRACHPAPCDQPP
Si005790m
NFX
532
563
CGQVCGAARRECKHTCTAPCHPSSQCPDLRCE
Links
Other
NFX
family TFs
Other
Setaria italica
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA005538
Oryza indica
BGIOSGA005538
N
BRADI3G57800
Brachypodium distachyon
BRADI3G57800
N
LPERR02G27810
Leersia perrieri
LPERR02G27810
N
OGLUM02G34390
Oryza glumaepatula
OGLUM02G34390
N
OLONG_009224
Oryza longistaminata
OLONG_009224
N
OPUNC02G31340
Oryza punctata
OPUNC02G31340
N
ORGLA11G0181000
Oryza glaberrima
ORGLA11G0181000
N