CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TMUE_s0052006200
(
Trichuris muris
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01422 (zf-NF-X1)
IPR000967
TMUE_s0052006200
T301145_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TMUE_s0052006200
NFX
154
171
CGHKCLLLCHSGPCPPCP
TMUE_s0052006200
NFX
207
225
CQAHRCNVSCHDGACPPCK
TMUE_s0052006200
NFX
239
251
EKRCHHGPCPPCR
TMUE_s0052006200
NFX
285
303
CGRHICSRRCCDGQCPPCE
TMUE_s0052006200
NFX
312
330
CKVHRCQQPCHTGPCYPCP
TMUE_s0052006200
NFX
376
388
SHACHYGRCPACL
TMUE_s0052006200
NFX
397
407
CGHQCLAKCHT
TMUE_s0052006200
NFX
477
498
CGNHFCQKPCHDVKNSDCDQCL
TMUE_s0052006200
NFX
509
526
CTHTCTLACHPSPCPPCN
TMUE_s0052006200
NFX
571
591
CGHQCAYDCHDGSCSDPVQCS
Links
Other
NFX
family TFs
Other
Trichuris muris
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA024080
Oryza indica
BGIOSGA024080
N
GRMZM2G402804
Zea mays
GRMZM2G402804
N
OGLUM07G18680
Oryza glumaepatula
OGLUM07G18680
N
OMERI07G15640
Oryza meridionalis
OMERI07G15640
N
ONIVA04G17620
Oryza nivara
ONIVA04G17620
N
ORGLA07G0153200
Oryza glaberrima
ORGLA07G0153200
N
ORUFI07G19680
Oryza rufipogon
ORUFI07G19680
N
OS07G0565300
Oryza sativa
OS07G0565300
N
Sb02g036530
Sorghum bicolor
Sb02g036530
N
Si029233m.g
Setaria italica
Si029233m.g
N